MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:32763408-32964234

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pisd	5	32736303 to 32785636	49333	-	protein coding gene	phosphatidylserine decarboxylase
Gm20671	5	32737230 to 32827109	89879	-	protein coding gene	predicted gene 20671
Cpgi15724	5	32785189 to 32785973	784		CpG island	CpG island 15724
Tssr50592	5	32785609 to 32785648	39	-	TSS region	transcription start site region 50592
Prr14l	5	32789820 to 32854256	64436	-	protein coding gene	proline rich 14-like
Gm43692	5	32799904 to 32800965	1061	-	unclassified gene	predicted gene 43692
Tssr50593	5	32820690 to 32820707	17	-	TSS region	transcription start site region 50593
Tssr45796	5	32838095 to 32838107	12	+	TSS region	transcription start site region 45796
Gm2623	5	32838129 to 32838414	285	+	pseudogene	predicted gene 2623
Cpgi15725	5	32853761 to 32854524	763		CpG island	CpG island 15725
Tssr50594	5	32854185 to 32854248	63	-	TSS region	transcription start site region 50594
Cpgi15726	5	32863408 to 32864234	826		CpG island	CpG island 15726
Tssr45797	5	32863700 to 32863776	76	+	TSS region	transcription start site region 45797
Depdc5	5	32863701 to 32994236	130535	+	protein coding gene	DEP domain containing 5
Tssr45798	5	32898319 to 32898353	34	+	TSS region	transcription start site region 45798
Tssr50595	5	32907642 to 32907664	22	-	TSS region	transcription start site region 50595
Tssr45799	5	32909343 to 32909346	3	+	TSS region	transcription start site region 45799
Gm24003	5	32913631 to 32913730	99	+	snRNA gene	predicted gene, 24003
D5Ertd477e	5	32946187 to 32946421	234		DNA segment	DNA segment, Chr 5, ERATO Doi 477, expressed