Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:32146922-32477119

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fosl2 5 32136472 to 32157840 21368 + protein coding gene fos-like antigen 2
Tssr50581 5 32146909 to 32146937 28 - TSS region transcription start site region 50581
Tssr45761 5 32150087 to 32150126 39 + TSS region transcription start site region 45761
Tssr45762 5 32152975 to 32152986 11 + TSS region transcription start site region 45762
Tssr45763 5 32156436 to 32156447 11 + TSS region transcription start site region 45763
Tssr45764 5 32156702 to 32156713 11 + TSS region transcription start site region 45764
Gm26335 5 32175099 to 32175205 106 + snRNA gene predicted gene, 26335
Gm36732 5 32182196 to 32185022 2826 - lncRNA gene predicted gene, 36732
Tssr50582 5 32184995 to 32185036 41 - TSS region transcription start site region 50582
Gm9555 5 32185497 to 32186079 582 + pseudogene predicted gene 9555
Tssr45765 5 32192408 to 32192442 34 + TSS region transcription start site region 45765
Tssr50583 5 32195958 to 32195961 3 - TSS region transcription start site region 50583
Gm36783 5 32225700 to 32232583 6883 - lncRNA gene predicted gene, 36783
Tssr45766 5 32232680 to 32232729 49 + TSS region transcription start site region 45766
Plb1 5 32232691 to 32364356 131665 + protein coding gene phospholipase B1
Tssr45767 5 32241169 to 32241184 15 + TSS region transcription start site region 45767
Tssr45768 5 32247449 to 32247468 19 + TSS region transcription start site region 45768
Tssr45769 5 32297628 to 32297630 2 + TSS region transcription start site region 45769
Tssr50584 5 32299673 to 32299676 3 - TSS region transcription start site region 50584
Gm15615 5 32311922 to 32312119 197 - pseudogene predicted gene 15615
Gm36840 5 32320764 to 32354883 34119 - antisense lncRNA gene predicted gene, 36840
Tssr45770 5 32353522 to 32353536 14 + TSS region transcription start site region 45770
Tssr45771 5 32353590 to 32353622 32 + TSS region transcription start site region 45771
Tssr45772 5 32353624 to 32353654 30 + TSS region transcription start site region 45772
Tssr50585 5 32354815 to 32354832 17 - TSS region transcription start site region 50585
Tssr50586 5 32354841 to 32354855 14 - TSS region transcription start site region 50586
Gm7596 5 32390047 to 32397908 7861 - lincRNA gene predicted gene 7596
D5Mit334 5 32417678 to 32417799 121 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 334
Gm5864 5 32420003 to 32420972 969 + pseudogene predicted gene 5864
D5Mit252 5 32442185 to 32442322 137 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 252
Cpgi15720 5 32458481 to 32459832 1351 CpG island CpG island 15720
Tssr50587 5 32458800 to 32458822 22 - TSS region transcription start site region 50587
Ppp1cb 5 32458848 to 32493712 34864 + protein coding gene protein phosphatase 1 catalytic subunit beta
Tssr1453 5 32458957 to 32458968 11 + TSS region transcription start site region 1453
Tssr45773 5 32459016 to 32459110 94 + TSS region transcription start site region 45773
Tssr45774 5 32459135 to 32459174 39 + TSS region transcription start site region 45774
Tssr45775 5 32459176 to 32459189 13 + TSS region transcription start site region 45775
Tssr45776 5 32459238 to 32459249 11 + TSS region transcription start site region 45776
Tssr45777 5 32459251 to 32459291 40 + TSS region transcription start site region 45777
Tssr45778 5 32459297 to 32459355 58 + TSS region transcription start site region 45778
Tssr45779 5 32459591 to 32459601 10 + TSS region transcription start site region 45779
Gm43312 5 32459828 to 32462293 2465 + unclassified gene predicted gene 43312
Tssr45780 5 32459994 to 32459998 4 + TSS region transcription start site region 45780
Gm43313 5 32467195 to 32469429 2234 + unclassified gene predicted gene 43313
Estq2 5 32476740 to 32476846 106 QTL estradiol regulated response QTL 2
D5Mit296 5 32476740 to 32476846 106 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 296