Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:28140122-28280133

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15646 5 28157899 to 28158623 724 CpG island CpG island 15646
Cpgi15647 5 28159124 to 28159516 392 CpG island CpG island 15647
Cpgi15648 5 28161739 to 28162489 750 CpG island CpG island 15648
Cpgi15649 5 28165038 to 28167342 2304 CpG island CpG island 15649
Tssr45514 5 28165359 to 28165370 11 + TSS region transcription start site region 45514
Tssr50436 5 28165463 to 28165474 11 - TSS region transcription start site region 50436
Tssr45515 5 28165690 to 28165717 27 + TSS region transcription start site region 45515
En2 5 28165696 to 28172166 6470 + protein coding gene engrailed 2
Mym 5 28168475 to 28168839 364 unclassified gene myocyte maintenance
Gm43610 5 28168476 to 28168840 364 - unclassified gene predicted gene 43610
Cpgi15650 5 28168601 to 28169165 564 CpG island CpG island 15650
Cpgi15651 5 28170331 to 28170496 165 CpG island CpG island 15651
Cpgi15652 5 28170952 to 28171321 369 CpG island CpG island 15652
Cpgi15653 5 28175374 to 28175551 177 CpG island CpG island 15653
Gm42242 5 28178207 to 28187954 9747 + lncRNA gene predicted gene, 42242
Gm35395 5 28189566 to 28200736 11170 + lncRNA gene predicted gene, 35395
Cnpy1 5 28200819 to 28245788 44969 - protein coding gene canopy FGF signaling regulator 1
Cpgi15654 5 28209265 to 28210478 1213 CpG island CpG island 15654
Tssr50437 5 28209747 to 28209764 17 - TSS region transcription start site region 50437
Tssr50438 5 28209818 to 28209829 11 - TSS region transcription start site region 50438
Tssr50439 5 28209843 to 28209862 19 - TSS region transcription start site region 50439
Tssr50440 5 28209904 to 28209914 10 - TSS region transcription start site region 50440
Tssr50441 5 28209916 to 28209935 19 - TSS region transcription start site region 50441
Tssr50442 5 28209961 to 28209979 18 - TSS region transcription start site region 50442
Tssr50443 5 28210031 to 28210034 3 - TSS region transcription start site region 50443
Tssr50444 5 28210047 to 28210055 8 - TSS region transcription start site region 50444
Tssr50445 5 28210067 to 28210082 15 - TSS region transcription start site region 50445
Tssr50446 5 28210087 to 28210100 13 - TSS region transcription start site region 50446
Tssr45516 5 28210122 to 28210133 11 + TSS region transcription start site region 45516
Tssr50447 5 28210170 to 28210179 9 - TSS region transcription start site region 50447
Tssr50448 5 28210392 to 28210396 4 - TSS region transcription start site region 50448
Tssr50449 5 28210398 to 28210405 7 - TSS region transcription start site region 50449
Tssr50450 5 28210414 to 28210428 14 - TSS region transcription start site region 50450
Tssr50451 5 28237879 to 28237888 9 - TSS region transcription start site region 50451