Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:25514461-25726940

Filter by:
30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr45467 5 25516039 to 25516048 9 + TSS region transcription start site region 45467
Tssr45468 5 25516057 to 25516058 1 + TSS region transcription start site region 45468
Tssr45469 5 25516061 to 25516102 41 + TSS region transcription start site region 45469
Cct8l1 5 25516067 to 25518027 1960 + protein coding gene chaperonin containing TCP1, subunit 8 (theta)-like 1
Cpgi15628 5 25529348 to 25530476 1128 CpG island CpG island 15628
Tssr50410 5 25529511 to 25529524 13 - TSS region transcription start site region 50410
Tssr50411 5 25529577 to 25529604 27 - TSS region transcription start site region 50411
Tssr50412 5 25529622 to 25529639 17 - TSS region transcription start site region 50412
Tssr45470 5 25529829 to 25529873 44 + TSS region transcription start site region 45470
Tssr45471 5 25529967 to 25530049 82 + TSS region transcription start site region 45471
1700096K18Rik 5 25530018 to 25531466 1448 + lincRNA gene RIKEN cDNA 1700096K18 gene
Gm43141 5 25532158 to 25532431 273 - pseudogene predicted gene 43141
Tssr50413 5 25532552 to 25532586 34 - TSS region transcription start site region 50413
Tssr50414 5 25533289 to 25533292 3 - TSS region transcription start site region 50414
Tssr45472 5 25555926 to 25555954 28 + TSS region transcription start site region 45472
Gm46903 5 25607367 to 25631445 24078 - lncRNA gene predicted gene, 46903
Gm42235 5 25614461 to 25626940 12479 + lncRNA gene predicted gene, 42235
Gm42234 5 25639850 to 25648323 8473 + lncRNA gene predicted gene, 42234
Gm10062 5 25659809 to 25661275 1466 - lincRNA gene predicted gene 10062
Gm43972 5 25659809 to 25661275 1466 + lincRNA gene predicted gene, 43972
Tssr50415 5 25665749 to 25665752 3 - TSS region transcription start site region 50415
Cpgi15629 5 25672242 to 25672422 180 CpG island CpG island 15629
A630024J24Rik 5 25677726 to 25681202 3476 unclassified gene RIKEN cDNA A630024J24 gene
Gm43143 5 25687373 to 25689395 2022 - unclassified gene predicted gene 43143
Xrcc2 5 25689814 to 25705797 15983 - protein coding gene X-ray repair complementing defective repair in Chinese hamster cells 2
Cpgi15630 5 25705374 to 25705977 603 CpG island CpG island 15630
Tssr50416 5 25705763 to 25705787 24 - TSS region transcription start site region 50416
Tssr50417 5 25705791 to 25705829 38 - TSS region transcription start site region 50417
Gm43142 5 25710226 to 25710586 360 + pseudogene predicted gene 43142
Tssr50418 5 25713192 to 25713203 11 - TSS region transcription start site region 50418