Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:25116459-25246463

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42233 5 25119371 to 25128316 8945 + lncRNA gene predicted gene, 42233
Gm19088 5 25126153 to 25126706 553 + pseudogene predicted gene, 19088
Gm33836 5 25167831 to 25175413 7582 + lncRNA gene predicted gene, 33836
Gm26051 5 25168372 to 25168464 92 - miRNA gene predicted gene, 26051
Tssr45456 5 25181459 to 25181463 4 + TSS region transcription start site region 45456
Galntl5 5 25181460 to 25220297 38837 + protein coding gene UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5
Tssr1439 5 25181470 to 25181475 5 + TSS region transcription start site region 1439
Tssr45457 5 25181491 to 25181512 21 + TSS region transcription start site region 45457
Gm26356 5 25188361 to 25188643 282 - unclassified non-coding RNA gene predicted gene, 26356
D5Jcs71 5 25195374 to 25195535 161 DNA segment DNA segment, Chr 5, John C. Schimenti 71
Cpgi15626 5 25222690 to 25223314 624 CpG island CpG island 15626
Tssr45458 5 25222844 to 25222855 11 + TSS region transcription start site region 45458
E130116L18Rik 5 25222848 to 25223153 305 - protein coding gene RIKEN cDNA E130116L18 gene
Tssr45459 5 25222862 to 25222951 89 + TSS region transcription start site region 45459
Galnt11 5 25222893 to 25265918 43025 + protein coding gene polypeptide N-acetylgalactosaminyltransferase 11