MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:24702843-24812856

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nub1	5	24685815 to 24710378	24563	+	protein coding gene	negative regulator of ubiquitin-like proteins 1
Gm26648	5	24696902 to 24704690	7788	-	antisense lncRNA gene	predicted gene, 26648
Tssr50361	5	24704656 to 24704671	15	-	TSS region	transcription start site region 50361
Tssr45447	5	24709062 to 24709079	17	+	TSS region	transcription start site region 45447
Tssr45448	5	24709567 to 24709591	24	+	TSS region	transcription start site region 45448
Wdr86	5	24711738 to 24730727	18989	-	protein coding gene	WD repeat domain 86
Cpgi15618	5	24729885 to 24731174	1289		CpG island	CpG island 15618
Tssr50362	5	24730611 to 24730622	11	-	TSS region	transcription start site region 50362
Tssr50363	5	24730635 to 24730655	20	-	TSS region	transcription start site region 50363
Gm42231	5	24730948 to 24740820	9872	+	lncRNA gene	predicted gene, 42231
Cpgi15619	5	24750787 to 24751422	635		CpG island	CpG island 15619
Tssr45449	5	24750897 to 24750918	21	+	TSS region	transcription start site region 45449
Crygn	5	24751002 to 24757843	6841	-	protein coding gene	crystallin, gamma N
Tssr50364	5	24752155 to 24752176	21	-	TSS region	transcription start site region 50364
Gm33591	5	24757042 to 24758814	1772	+	lncRNA gene	predicted gene, 33591
Cpgi15620	5	24757735 to 24758041	306		CpG island	CpG island 15620
Tssr50365	5	24757843 to 24757856	13	-	TSS region	transcription start site region 50365
Cpgi15621	5	24778692 to 24779066	374		CpG island	CpG island 15621
Rheb	5	24802823 to 24842361	39538	-	protein coding gene	Ras homolog enriched in brain