MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:24437575-24458089

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc4a2	5	24423837 to 24440950	17113	+	protein coding gene	solute carrier family 4 (anion exchanger), member 2
Gm22333	5	24438486 to 24438586	100	-	snRNA gene	predicted gene, 22333
Fastk	5	24441039 to 24445282	4243	-	protein coding gene	Fas-activated serine/threonine kinase
Cpgi15601	5	24444534 to 24446057	1523		CpG island	CpG island 15601
Tssr50323	5	24445166 to 24445220	54	-	TSS region	transcription start site region 50323
Tssr50324	5	24445224 to 24445252	28	-	TSS region	transcription start site region 50324
Tssr50325	5	24445254 to 24445275	21	-	TSS region	transcription start site region 50325
Tmub1	5	24445458 to 24447854	2396	-	protein coding gene	transmembrane and ubiquitin-like domain containing 1
Cpgi15602	5	24447575 to 24448089	514		CpG island	CpG island 15602
Tssr50326	5	24447775 to 24447830	55	-	TSS region	transcription start site region 50326
2310074N15Rik	5	24447908 to 24448489	581	+	lincRNA gene	RIKEN cDNA 2310074N15 gene
Gm10472	5	24449608 to 24451709	2101	-	protein coding gene	predicted gene 10472
Cpgi15603	5	24451437 to 24453318	1881		CpG island	CpG island 15603
Tssr50327	5	24451702 to 24451746	44	-	TSS region	transcription start site region 50327
Tssr45426	5	24451937 to 24451969	32	+	TSS region	transcription start site region 45426
Tssr45427	5	24451973 to 24451990	17	+	TSS region	transcription start site region 45427
Agap3	5	24452177 to 24502047	49870	+	protein coding gene	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3