Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:24378681-24424947

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nos3 5 24364819 to 24384474 19655 + protein coding gene nitric oxide synthase 3, endothelial cell
Gm15587 5 24366192 to 24383614 17422 - antisense lncRNA gene predicted gene 15587
Cpgi15595 5 24383291 to 24383978 687 CpG island CpG island 15595
Tssr45409 5 24383496 to 24383521 25 + TSS region transcription start site region 45409
Tssr45410 5 24383547 to 24383561 14 + TSS region transcription start site region 45410
Tssr50314 5 24383608 to 24383621 13 - TSS region transcription start site region 50314
Atg9b 5 24384181 to 24392143 7962 - protein coding gene autophagy related 9B
Cpgi15596 5 24387314 to 24388691 1377 CpG island CpG island 15596
Tssr50315 5 24391945 to 24391961 16 - TSS region transcription start site region 50315
Tssr50316 5 24391964 to 24392007 43 - TSS region transcription start site region 50316
Tssr50317 5 24392012 to 24392031 19 - TSS region transcription start site region 50317
Tssr50318 5 24392490 to 24392494 4 - TSS region transcription start site region 50318
Tssr50319 5 24392679 to 24392698 19 - TSS region transcription start site region 50319
Tssr45411 5 24393640 to 24393664 24 + TSS region transcription start site region 45411
Abcb8 5 24393681 to 24409947 16266 + protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 8
Cpgi15597 5 24394236 to 24394756 520 CpG island CpG island 15597
Tssr45412 5 24394388 to 24394430 42 + TSS region transcription start site region 45412
Tssr45413 5 24413382 to 24413398 16 + TSS region transcription start site region 45413
Asic3 5 24413392 to 24417835 4443 + protein coding gene acid-sensing (proton-gated) ion channel 3
Tssr45414 5 24413406 to 24413420 14 + TSS region transcription start site region 45414
Cpgi15598 5 24416154 to 24416763 609 CpG island CpG island 15598
Cdk5 5 24418241 to 24423530 5289 - protein coding gene cyclin-dependent kinase 5
Cpgi15599 5 24423201 to 24424375 1174 CpG island CpG island 15599
Tssr50320 5 24423492 to 24423501 9 - TSS region transcription start site region 50320
Tssr50321 5 24423516 to 24423538 22 - TSS region transcription start site region 50321
Tssr50322 5 24423541 to 24423589 48 - TSS region transcription start site region 50322
Tssr45415 5 24423805 to 24423848 43 + TSS region transcription start site region 45415
Slc4a2 5 24423837 to 24440950 17113 + protein coding gene solute carrier family 4 (anion exchanger), member 2
Tssr45416 5 24423851 to 24423865 14 + TSS region transcription start site region 45416
Tssr45417 5 24423914 to 24423958 44 + TSS region transcription start site region 45417
Cpgi15600 5 24424780 to 24425865 1085 CpG island CpG island 15600