MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:22747503-23363129

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lhfpl3	5	22746059 to 23275597	529538	+	protein coding gene	lipoma HMGIC fusion partner-like 3
Gm21846	5	22775630 to 22778702	3072	+	lincRNA gene	predicted gene, 21846
A930037G07Rik	5	22781339 to 22782250	911		unclassified gene	RIKEN cDNA A930037G07 gene
Cpgi15577	5	22851612 to 22851796	184		CpG island	CpG island 15577
Gm43169	5	22863812 to 22868545	4733	-	unclassified gene	predicted gene 43169
Tssr45353	5	22908333 to 22908359	26	+	TSS region	transcription start site region 45353
Gm6564	5	22931395 to 22932013	618	-	pseudogene	predicted pseudogene 6564
Tssr50258	5	22932066 to 22932076	10	-	TSS region	transcription start site region 50258
Tssr45354	5	22991075 to 22991076	1	+	TSS region	transcription start site region 45354
Gm11159	5	23052503 to 23058129	5626		unclassified gene	predicted gene 11159
Tssr45355	5	23102377 to 23102387	10	+	TSS region	transcription start site region 45355
Tssr45356	5	23102389 to 23102413	24	+	TSS region	transcription start site region 45356
Gm3668	5	23143397 to 23145926	2529	+	pseudogene	predicted gene 3668
Gm42948	5	23200920 to 23223796	22876	-	antisense lncRNA gene	predicted gene 42948
Gm28022	5	23279866 to 23279911	45	-	miRNA gene	predicted gene, 28022
Tssr45357	5	23314322 to 23314333	11	+	TSS region	transcription start site region 45357
Tssr45358	5	23314346 to 23314356	10	+	TSS region	transcription start site region 45358
Gm42951	5	23330370 to 23347274	16904	-	lincRNA gene	predicted gene 42951
Gm17434	5	23330644 to 23339650	9006	+	protein coding gene	predicted gene, 17434