Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:21706400-21867148

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi15568 5 21736948 to 21737726 778 CpG island CpG island 15568
Tssr45343 5 21737142 to 21737179 37 + TSS region transcription start site region 45343
Pmpcb 5 21737160 to 21757152 19992 + protein coding gene peptidase (mitochondrial processing) beta
Gm15715 5 21748231 to 21748513 282 - pseudogene predicted gene 15715
Dnajc2 5 21757273 to 21785249 27976 - protein coding gene DnaJ heat shock protein family (Hsp40) member C2
Tssr50245 5 21768465 to 21768496 31 - TSS region transcription start site region 50245
Tssr50246 5 21773817 to 21773831 14 - TSS region transcription start site region 50246
Cpgi15569 5 21784417 to 21785340 923 CpG island CpG island 15569
Tssr50247 5 21785093 to 21785098 5 - TSS region transcription start site region 50247
Tssr50248 5 21785115 to 21785232 117 - TSS region transcription start site region 50248
Tssr45344 5 21785253 to 21785301 48 + TSS region transcription start site region 45344
Psmc2 5 21785283 to 21803784 18501 + protein coding gene proteasome (prosome, macropain) 26S subunit, ATPase 2
Cpgi15570 5 21786400 to 21787148 748 CpG island CpG island 15570
Tssr45345 5 21786739 to 21786784 45 + TSS region transcription start site region 45345
Tssr45346 5 21786791 to 21786804 13 + TSS region transcription start site region 45346
Tssr45347 5 21790606 to 21790607 1 + TSS region transcription start site region 45347
Slc26a5 5 21810655 to 21865604 54949 - protein coding gene solute carrier family 26, member 5
D5Mit61 5 21862445 to 21862543 98 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 61
D5Buc45 5 21862952 to 21863225 273 DNA segment DNA segment, Chr 5, Bucan 45
Cpgi15571 5 21865428 to 21865818 390 CpG island CpG island 15571
Tssr50249 5 21865606 to 21865617 11 - TSS region transcription start site region 50249