MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:146977525-147177542

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm46936	5	146978789 to 146981774	2985	-	pseudogene	predicted gene, 46936
Lnx2	5	147016655 to 147076572	59917	-	protein coding gene	ligand of numb-protein X 2
Tssr54495	5	147018349 to 147018363	14	-	TSS region	transcription start site region 54495
Cpgi17038	5	147024302 to 147024639	337		CpG island	CpG island 17038
Tssr54496	5	147042664 to 147042673	9	-	TSS region	transcription start site region 54496
Tssr54497	5	147063294 to 147063304	10	-	TSS region	transcription start site region 54497
Tssr54498	5	147065790 to 147065796	6	-	TSS region	transcription start site region 54498
Cpgi17039	5	147076102 to 147078125	2023		CpG island	CpG island 17039
Tssr49802	5	147076188 to 147076199	11	+	TSS region	transcription start site region 49802
Tssr54499	5	147076482 to 147076565	83	-	TSS region	transcription start site region 54499
Tssr54500	5	147076575 to 147076591	16	-	TSS region	transcription start site region 54500
Tssr49803	5	147076704 to 147076729	25	+	TSS region	transcription start site region 49803
Polr1d	5	147077346 to 147111361	34015	+	protein coding gene	polymerase (RNA) I polypeptide D
Tssr54501	5	147077388 to 147077419	31	-	TSS region	transcription start site region 54501
Tssr49804	5	147077525 to 147077542	17	+	TSS region	transcription start site region 49804
Tssr49805	5	147077545 to 147077585	40	+	TSS region	transcription start site region 49805
Rps10-ps4	5	147100562 to 147101053	491	-	pseudogene	ribosomal protein S10, pseudogene 4
Gm34994	5	147159300 to 147168623	9323	+	lncRNA gene	predicted gene, 34994