Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:143199939-143270944

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spdye4b 5 143181017 to 143205075 24058 + protein coding gene speedy/RINGO cell cycle regulator family, member E4B
Spdye4a 5 143216316 to 143226890 10574 - protein coding gene speedy/RINGO cell cycle regulator family, member E4A
Tssr54359 5 143225876 to 143225892 16 - TSS region transcription start site region 54359
4930448H16Rik 5 143227718 to 143234748 7030 + lincRNA gene RIKEN cDNA 4930448H16 gene
Gm38735 5 143228426 to 143235046 6620 - lncRNA gene predicted gene, 38735
Cpgi16975 5 143234939 to 143235944 1005 CpG island CpG island 16975
Tssr49640 5 143235143 to 143235251 108 + TSS region transcription start site region 49640
Zfp12 5 143235163 to 143248834 13671 + protein coding gene zinc finger protein 12
Tssr49641 5 143240384 to 143240392 8 + TSS region transcription start site region 49641
Tssr54360 5 143247627 to 143247633 6 - TSS region transcription start site region 54360
Zfp316 5 143249697 to 143270022 20325 - protein coding gene zinc finger protein 316
Cpgi16976 5 143252904 to 143255719 2815 CpG island CpG island 16976
Cpgi16977 5 143269054 to 143270456 1402 CpG island CpG island 16977
Tssr54361 5 143269958 to 143270018 60 - TSS region transcription start site region 54361
Tssr49642 5 143270044 to 143270084 40 + TSS region transcription start site region 49642
BC030343 5 143270075 to 143272513 2438 + lincRNA gene cDNA sequence BC030343