Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:142971024-143141028

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fscn1 5 142960355 to 142973189 12834 + protein coding gene fascin actin-bundling protein 1
Tssr49622 5 142972087 to 142972100 13 + TSS region transcription start site region 49622
Tssr49623 5 142972115 to 142972133 18 + TSS region transcription start site region 49623
Tssr49624 5 142972242 to 142972258 16 + TSS region transcription start site region 49624
Tssr49625 5 142972293 to 142972311 18 + TSS region transcription start site region 49625
Tssr49626 5 142972335 to 142972354 19 + TSS region transcription start site region 49626
Tssr49627 5 142972367 to 142972393 26 + TSS region transcription start site region 49627
Tssr49628 5 142972415 to 142972433 18 + TSS region transcription start site region 49628
Tssr49629 5 142972440 to 142972496 56 + TSS region transcription start site region 49629
Tssr49630 5 142972684 to 142972726 42 + TSS region transcription start site region 49630
Tssr49631 5 142972774 to 142972781 7 + TSS region transcription start site region 49631
Tssr49632 5 142972844 to 142972870 26 + TSS region transcription start site region 49632
Tssr49633 5 142972879 to 142972892 13 + TSS region transcription start site region 49633
Tssr49634 5 142973027 to 142973051 24 + TSS region transcription start site region 49634
Cpgi16969 5 142974766 to 142974994 228 CpG island CpG island 16969
Rnf216 5 142990893 to 143112994 122101 - protein coding gene ring finger protein 216
Tssr54347 5 143018170 to 143018177 7 - TSS region transcription start site region 54347
Tssr49635 5 143027815 to 143027820 5 + TSS region transcription start site region 49635
Tssr49636 5 143039003 to 143039064 61 + TSS region transcription start site region 49636
Gm43378 5 143049462 to 143050043 581 - sense intronic lncRNA gene predicted gene 43378
D5Mit62 5 143053482 to 143053687 205 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 62
Tssr54348 5 143056024 to 143056028 4 - TSS region transcription start site region 54348
Gm43380 5 143067653 to 143067872 219 + pseudogene predicted gene 43380
D5Ertd683e 5 143085344 to 143085572 228 DNA segment DNA segment, Chr 5, ERATO Doi 683, expressed
Tssr54349 5 143104866 to 143104892 26 - TSS region transcription start site region 54349
Cpgi16970 5 143112057 to 143113255 1198 CpG island CpG island 16970
Tssr54350 5 143112971 to 143112987 16 - TSS region transcription start site region 54350
Tssr54351 5 143113008 to 143113019 11 - TSS region transcription start site region 54351
Cpgi16971 5 143129055 to 143129325 270 CpG island CpG island 16971
Gm38734 5 143133125 to 143133896 771 + lncRNA gene predicted gene, 38734
Olfr718-ps1 5 143137232 to 143138197 965 - pseudogene olfactory receptor 718, pseudogene 1