Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:140695444-140825462

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Iqce 5 140662553 to 140702429 39876 - protein coding gene IQ motif containing E
Cpgi16929 5 140701566 to 140702450 884 CpG island CpG island 16929
Tssr54242 5 140702023 to 140702035 12 - TSS region transcription start site region 54242
Tssr54243 5 140702048 to 140702068 20 - TSS region transcription start site region 54243
Tssr54244 5 140702220 to 140702236 16 - TSS region transcription start site region 54244
Tssr54245 5 140702241 to 140702321 80 - TSS region transcription start site region 54245
Tssr49556 5 140702464 to 140702473 9 + TSS region transcription start site region 49556
Cpgi16930 5 140704416 to 140705499 1083 CpG island CpG island 16930
Tssr49557 5 140705006 to 140705037 31 + TSS region transcription start site region 49557
Brat1 5 140705011 to 140719379 14368 + protein coding gene BRCA1-associated ATM activator 1
Tssr49558 5 140705076 to 140705091 15 + TSS region transcription start site region 49558
Tssr49559 5 140705099 to 140705110 11 + TSS region transcription start site region 49559
Cpgi16931 5 140724038 to 140724245 207 CpG island CpG island 16931
Amz1 5 140724127 to 140753312 29185 + protein coding gene archaelysin family metallopeptidase 1
Cpgi16932 5 140735358 to 140735915 557 CpG island CpG island 16932
Tssr49560 5 140735531 to 140735548 17 + TSS region transcription start site region 49560
Tssr49561 5 140735556 to 140735567 11 + TSS region transcription start site region 49561
Gm30745 5 140748690 to 140750087 1397 - lncRNA gene predicted gene, 30745
D5Dcr26 5 140753316 to 140753418 102 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 26
Tssr54246 5 140759938 to 140759964 26 - TSS region transcription start site region 54246
Gna12 5 140759944 to 140830431 70487 - protein coding gene guanine nucleotide binding protein, alpha 12
Tssr54247 5 140760264 to 140760286 22 - TSS region transcription start site region 54247
Tssr54248 5 140760444 to 140760462 18 - TSS region transcription start site region 54248
Tssr54249 5 140760469 to 140760496 27 - TSS region transcription start site region 54249
Tssr54250 5 140760497 to 140760518 21 - TSS region transcription start site region 54250
Tssr54251 5 140760533 to 140760553 20 - TSS region transcription start site region 54251
Tssr49562 5 140767955 to 140767971 16 + TSS region transcription start site region 49562
Tssr54252 5 140773699 to 140773704 5 - TSS region transcription start site region 54252
D5Mit247 5 140800177 to 140800337 160 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 247
Tssr54253 5 140808522 to 140808527 5 - TSS region transcription start site region 54253
Tssr54254 5 140812083 to 140812086 3 - TSS region transcription start site region 54254
D5Mit327 5 140821714 to 140821812 98 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 327