MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:139646647-139757022

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16899	5	139659339 to 139659647	308		CpG island	CpG island 16899
Gm46926	5	139660862 to 139669212	8350	-	lncRNA gene	predicted gene, 46926
Cpgi16900	5	139668487 to 139668912	425		CpG island	CpG island 16900
Cpgi16901	5	139687820 to 139687976	156		CpG island	CpG island 16901
Gm42424	5	139701647 to 139702022	375	+	pseudogene	predicted gene 42424
D5Dcr18	5	139702313 to 139702413	100		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 18
Micall2	5	139706696 to 139736336	29640	-	protein coding gene	MICAL-like 2
Tssr54170	5	139716416 to 139716427	11	-	TSS region	transcription start site region 54170
Tssr54171	5	139716495 to 139716524	29	-	TSS region	transcription start site region 54171
Tssr49523	5	139722931 to 139722941	10	+	TSS region	transcription start site region 49523
Tssr49524	5	139723290 to 139723304	14	+	TSS region	transcription start site region 49524
D5Dcr19	5	139726842 to 139726939	97		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 19
Cpgi16902	5	139732755 to 139732911	156		CpG island	CpG island 16902
Cpgi16903	5	139735886 to 139736557	671		CpG island	CpG island 16903
Tssr54172	5	139736266 to 139736287	21	-	TSS region	transcription start site region 54172
Tssr54173	5	139736291 to 139736332	41	-	TSS region	transcription start site region 54173
Tssr49525	5	139736797 to 139736803	6	+	TSS region	transcription start site region 49525
Ints1	5	139751282 to 139775674	24392	-	protein coding gene	integrator complex subunit 1
Cpgi16904	5	139754935 to 139755341	406		CpG island	CpG island 16904