MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:139196808-139308178

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16875	5	139200155 to 139201409	1254		CpG island	CpG island 16875
Tssr49491	5	139200631 to 139200678	47	+	TSS region	transcription start site region 49491
Sun1	5	139200637 to 139249840	49203	+	protein coding gene	Sad1 and UNC84 domain containing 1
Tssr49492	5	139211934 to 139211948	14	+	TSS region	transcription start site region 49492
4930520M14Rik	5	139215469 to 139216356	887	-	antisense lncRNA gene	RIKEN cDNA 4930520M14 gene
Tssr54136	5	139216314 to 139216358	44	-	TSS region	transcription start site region 54136
Tssr49493	5	139217754 to 139217758	4	+	TSS region	transcription start site region 49493
Cpgi16876	5	139251808 to 139253178	1370		CpG island	CpG island 16876
Tssr49494	5	139252314 to 139252329	15	+	TSS region	transcription start site region 49494
Get4	5	139252324 to 139270051	17727	+	protein coding gene	golgi to ER traffic protein 4
Tssr49495	5	139252343 to 139252455	112	+	TSS region	transcription start site region 49495
Tssr49496	5	139252722 to 139252787	65	+	TSS region	transcription start site region 49496
Tssr49497	5	139253489 to 139253519	30	+	TSS region	transcription start site region 49497
Tssr49498	5	139256632 to 139256636	4	+	TSS region	transcription start site region 49498
Adap1	5	139271876 to 139325464	53588	-	protein coding gene	ArfGAP with dual PH domains 1
Cpgi16877	5	139282240 to 139282488	248		CpG island	CpG island 16877
Tssr54137	5	139306261 to 139306305	44	-	TSS region	transcription start site region 54137