Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:138884588-138995163

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31891 5 138863046 to 138910604 47558 + pseudogene predicted gene, 31891
Cpgi16870 5 138894474 to 138894786 312 CpG island CpG island 16870
Gm38726 5 138934588 to 138945163 10575 + lncRNA gene predicted gene, 38726
Pdgfa 5 138976381 to 138997686 21305 - protein coding gene platelet derived growth factor, alpha
Tssr54109 5 138976512 to 138976516 4 - TSS region transcription start site region 54109
Tssr49481 5 138976974 to 138977016 42 + TSS region transcription start site region 49481
Tssr54110 5 138977003 to 138977055 52 - TSS region transcription start site region 54110
Tssr54111 5 138977076 to 138977092 16 - TSS region transcription start site region 54111
Tssr54112 5 138977095 to 138977106 11 - TSS region transcription start site region 54112
Tssr54113 5 138977136 to 138977152 16 - TSS region transcription start site region 54113
Tssr54114 5 138977185 to 138977196 11 - TSS region transcription start site region 54114
Cpgi16871 5 138992864 to 138996563 3699 CpG island CpG island 16871
Tssr54115 5 138993093 to 138993113 20 - TSS region transcription start site region 54115
Tssr54116 5 138994112 to 138994124 12 - TSS region transcription start site region 54116
Tssr54117 5 138994935 to 138994983 48 - TSS region transcription start site region 54117
Tssr49482 5 138995038 to 138995066 28 + TSS region transcription start site region 49482
6330403L08Rik 5 138995056 to 139000577 5521 + antisense lncRNA gene RIKEN cDNA 6330403L08 gene