Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137889741-138089753

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp3a13 5 137892933 to 137921619 28686 - protein coding gene cytochrome P450, family 3, subfamily a, polypeptide 13
Tssr54058 5 137893623 to 137893641 18 - TSS region transcription start site region 54058
Gm15502 5 137896752 to 137896959 207 - pseudogene predicted gene 15502
Tssr54059 5 137897955 to 137897960 5 - TSS region transcription start site region 54059
Tssr54060 5 137921612 to 137921628 16 - TSS region transcription start site region 54060
Gm8099 5 137928275 to 137929016 741 + pseudogene predicted gene 8099
Tssr49401 5 137928294 to 137928307 13 + TSS region transcription start site region 49401
Tssr49402 5 137928670 to 137928684 14 + TSS region transcription start site region 49402
Gjc3 5 137953461 to 137963098 9637 - protein coding gene gap junction protein, gamma 3
D5Mit221 5 137956159 to 137956304 145 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 221
Tssr54061 5 137956345 to 137956356 11 - TSS region transcription start site region 54061
Tssr54062 5 137962911 to 137962931 20 - TSS region transcription start site region 54062
Tssr54063 5 137962933 to 137962938 5 - TSS region transcription start site region 54063
Tssr54064 5 137962955 to 137962967 12 - TSS region transcription start site region 54064
Tssr54065 5 137962975 to 137962984 9 - TSS region transcription start site region 54065
Tssr54066 5 137963029 to 137963040 11 - TSS region transcription start site region 54066
Tssr54067 5 137963042 to 137963056 14 - TSS region transcription start site region 54067
Tssr54068 5 137963062 to 137963073 11 - TSS region transcription start site region 54068
Tssr54069 5 137963087 to 137963109 22 - TSS region transcription start site region 54069
Tssr54070 5 137963135 to 137963138 3 - TSS region transcription start site region 54070
Tssr1722 5 137981489 to 137981499 10 + TSS region transcription start site region 1722
Tssr49403 5 137981512 to 137981556 44 + TSS region transcription start site region 49403
Azgp1 5 137981521 to 137990233 8712 + protein coding gene alpha-2-glycoprotein 1, zinc
Tssr1723 5 137981560 to 137981569 9 + TSS region transcription start site region 1723
Tssr49404 5 137985382 to 137985390 8 + TSS region transcription start site region 49404
Tssr49405 5 137989741 to 137989753 12 + TSS region transcription start site region 49405
Tssr49406 5 137989797 to 137989806 9 + TSS region transcription start site region 49406
Tssr49407 5 137989948 to 137989957 9 + TSS region transcription start site region 49407
Tssr54071 5 137989973 to 137989995 22 - TSS region transcription start site region 54071
Gm4963 5 137993047 to 137993424 377 - pseudogene predicted gene 4963
Gm29127 5 138017419 to 138017935 516 + pseudogene predicted gene 29127
Smok3a 5 138021276 to 138034665 13389 + protein coding gene sperm motility kinase 3A
Smok3b 5 138037224 to 138050633 13409 + protein coding gene sperm motility kinase 3B
Smok3c 5 138053194 to 138066537 13343 + protein coding gene sperm motility kinase 3C
Cpgi16852 5 138085015 to 138085674 659 CpG island CpG island 16852
Tssr49408 5 138085083 to 138085147 64 + TSS region transcription start site region 49408
Zkscan1 5 138085084 to 138107822 22738 + protein coding gene zinc finger with KRAB and SCAN domains 1
Tssr49409 5 138085173 to 138085182 9 + TSS region transcription start site region 49409
Tssr49410 5 138089283 to 138089295 12 + TSS region transcription start site region 49410