Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137607505-137630078

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcolce 5 137605105 to 137611764 6659 - protein coding gene procollagen C-endopeptidase enhancer protein
Cpgi16842 5 137608873 to 137609128 255 CpG island CpG island 16842
Tssr54005 5 137608927 to 137608950 23 - TSS region transcription start site region 54005
Tssr49350 5 137610387 to 137610406 19 + TSS region transcription start site region 49350
Tssr54006 5 137610425 to 137610452 27 - TSS region transcription start site region 54006
Tssr54007 5 137610464 to 137610489 25 - TSS region transcription start site region 54007
Tssr54008 5 137610609 to 137610620 11 - TSS region transcription start site region 54008
Tssr54009 5 137610626 to 137610651 25 - TSS region transcription start site region 54009
Tssr54010 5 137611337 to 137611348 11 - TSS region transcription start site region 54010
Tssr54011 5 137611372 to 137611428 56 - TSS region transcription start site region 54011
Tssr54012 5 137611429 to 137611442 13 - TSS region transcription start site region 54012
Fbxo24 5 137612505 to 137625078 12573 - protein coding gene F-box protein 24
Gm36266 5 137612852 to 137615247 2395 + antisense lncRNA gene predicted gene, 36266
Tssr54013 5 137613759 to 137613785 26 - TSS region transcription start site region 54013
Tssr49351 5 137615610 to 137615621 11 + TSS region transcription start site region 49351
Gm16089 5 137615627 to 137615962 335 + pseudogene predicted gene 16089
Tssr54014 5 137625035 to 137625056 21 - TSS region transcription start site region 54014
Tssr54015 5 137625059 to 137625067 8 - TSS region transcription start site region 54015
Tssr54016 5 137625069 to 137625079 10 - TSS region transcription start site region 54016
Tssr49352 5 137625193 to 137625204 11 + TSS region transcription start site region 49352
Cpgi16843 5 137628577 to 137629676 1099 CpG island CpG island 16843
Tssr49353 5 137629112 to 137629123 11 + TSS region transcription start site region 49353
Lrch4 5 137629123 to 137641099 11976 + protein coding gene leucine-rich repeats and calponin homology (CH) domain containing 4
Tssr49354 5 137629149 to 137629160 11 + TSS region transcription start site region 49354
Tssr49355 5 137629169 to 137629202 33 + TSS region transcription start site region 49355
Gm20605 5 137629175 to 137642899 13724 + protein coding gene predicted gene 20605