Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137543352-137624079

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16836 5 137553323 to 137553902 579 CpG island CpG island 16836
Tssr49338 5 137553513 to 137553520 7 + TSS region transcription start site region 49338
Actl6b 5 137553524 to 137569582 16058 + protein coding gene actin-like 6B
Tssr49339 5 137553530 to 137553600 70 + TSS region transcription start site region 49339
Tssr49340 5 137553601 to 137553608 7 + TSS region transcription start site region 49340
Tssr49341 5 137564533 to 137564535 2 + TSS region transcription start site region 49341
Tssr49342 5 137569824 to 137569845 21 + TSS region transcription start site region 49342
Tfr2 5 137569840 to 137587481 17641 + protein coding gene transferrin receptor 2
Tssr49343 5 137569856 to 137569879 23 + TSS region transcription start site region 49343
Tssr49344 5 137570950 to 137570990 40 + TSS region transcription start site region 49344
Tssr49345 5 137571374 to 137571395 21 + TSS region transcription start site region 49345
Cpgi16837 5 137574387 to 137575011 624 CpG island CpG island 16837
Cpgi16838 5 137583352 to 137584079 727 CpG island CpG island 16838
Cpgi16839 5 137586834 to 137587080 246 CpG island CpG island 16839
Mospd3 5 137596645 to 137601058 4413 - protein coding gene motile sperm domain containing 3
Cpgi16840 5 137596673 to 137597116 443 CpG island CpG island 16840
Tssr49346 5 137597005 to 137597015 10 + TSS region transcription start site region 49346
Tssr53998 5 137597305 to 137597318 13 - TSS region transcription start site region 53998
Tssr53999 5 137599782 to 137599819 37 - TSS region transcription start site region 53999
Cpgi16841 5 137600260 to 137601669 1409 CpG island CpG island 16841
Tssr54000 5 137600626 to 137600645 19 - TSS region transcription start site region 54000
Tssr54001 5 137600650 to 137600740 90 - TSS region transcription start site region 54001
Tssr54002 5 137600779 to 137600790 11 - TSS region transcription start site region 54002
Tssr54003 5 137601043 to 137601075 32 - TSS region transcription start site region 54003
Tssr49347 5 137601193 to 137601250 57 + TSS region transcription start site region 49347
Tssr49348 5 137601353 to 137601363 10 + TSS region transcription start site region 49348
Tssr49349 5 137601559 to 137601560 1 + TSS region transcription start site region 49349
Gm7285 5 137601593 to 137602172 579 + pseudogene predicted gene 7285
Pcolce 5 137605105 to 137611764 6659 - protein coding gene procollagen C-endopeptidase enhancer protein
Tssr54004 5 137606902 to 137606921 19 - TSS region transcription start site region 54004
Cpgi16842 5 137608873 to 137609128 255 CpG island CpG island 16842
Tssr54005 5 137608927 to 137608950 23 - TSS region transcription start site region 54005
Tssr49350 5 137610387 to 137610406 19 + TSS region transcription start site region 49350
Tssr54006 5 137610425 to 137610452 27 - TSS region transcription start site region 54006
Tssr54007 5 137610464 to 137610489 25 - TSS region transcription start site region 54007
Tssr54008 5 137610609 to 137610620 11 - TSS region transcription start site region 54008
Tssr54009 5 137610626 to 137610651 25 - TSS region transcription start site region 54009
Tssr54010 5 137611337 to 137611348 11 - TSS region transcription start site region 54010
Tssr54011 5 137611372 to 137611428 56 - TSS region transcription start site region 54011
Tssr54012 5 137611429 to 137611442 13 - TSS region transcription start site region 54012
Fbxo24 5 137612505 to 137625078 12573 - protein coding gene F-box protein 24
Gm36266 5 137612852 to 137615247 2395 + antisense lncRNA gene predicted gene, 36266
Tssr54013 5 137613759 to 137613785 26 - TSS region transcription start site region 54013
Tssr49351 5 137615610 to 137615621 11 + TSS region transcription start site region 49351
Gm16089 5 137615627 to 137615962 335 + pseudogene predicted gene 16089