Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137428036-137530148

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zan 5 137378637 to 137477064 98427 - protein coding gene zonadhesin
D5Mit326 5 137429891 to 137430014 123 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 326
Rpl36-ps9 5 137432987 to 137433263 276 + pseudogene ribosomal protein L36, pseudogene 9
D5Mit373 5 137433664 to 137433787 123 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 373
Tssr53978 5 137472226 to 137472239 13 - TSS region transcription start site region 53978
Tssr53979 5 137477071 to 137477102 31 - TSS region transcription start site region 53979
Gm38725 5 137478036 to 137480148 2112 + lncRNA gene predicted gene, 38725
Gm36056 5 137482894 to 137485503 2609 + lncRNA gene predicted gene, 36056
Epo 5 137483020 to 137485816 2796 - protein coding gene erythropoietin
Cpgi16830 5 137485709 to 137486054 345 CpG island CpG island 16830
D5Mit46 5 137489159 to 137489392 233 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 46
Pop7 5 137501439 to 137502429 990 - protein coding gene processing of precursor 7, ribonuclease P family, (S. cerevisiae)
Cpgi16831 5 137501734 to 137503164 1430 CpG island CpG island 16831
Tssr53980 5 137502358 to 137502390 32 - TSS region transcription start site region 53980
Tssr53981 5 137502402 to 137502436 34 - TSS region transcription start site region 53981
9130604C24Rik 5 137502673 to 137503628 955 + lincRNA gene RIKEN cDNA 9130604C24 gene
Cpgi16832 5 137509772 to 137511430 1658 CpG island CpG island 16832
Gm8066 5 137510253 to 137517501 7248 + lincRNA gene predicted gene 8066
Tssr49335 5 137510406 to 137510460 54 + TSS region transcription start site region 49335
Tssr1719 5 137517459 to 137517479 20 + TSS region transcription start site region 1719
Gigyf1 5 137518548 to 137527935 9387 + protein coding gene GRB10 interacting GYF protein 1
Tssr49336 5 137527282 to 137527285 3 + TSS region transcription start site region 49336
Gnb2 5 137528129 to 137533229 5100 - protein coding gene guanine nucleotide binding protein (G protein), beta 2
Tssr53982 5 137528496 to 137528512 16 - TSS region transcription start site region 53982
Tssr53983 5 137528888 to 137528914 26 - TSS region transcription start site region 53983
Tssr53984 5 137529107 to 137529115 8 - TSS region transcription start site region 53984
Tssr53985 5 137529135 to 137529173 38 - TSS region transcription start site region 53985
Mir6418 5 137529480 to 137529594 114 - miRNA gene microRNA 6418
Tssr53986 5 137529675 to 137529692 17 - TSS region transcription start site region 53986
Tssr53987 5 137529876 to 137529892 16 - TSS region transcription start site region 53987