Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:137027049-137097065

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vgf 5 137026392 to 137033351 6959 + protein coding gene VGF nerve growth factor inducible
Cpgi16810 5 137028643 to 137029139 496 CpG island CpG island 16810
Cpgi16811 5 137029571 to 137033131 3560 CpG island CpG island 16811
Tssr49304 5 137030275 to 137030290 15 + TSS region transcription start site region 49304
Tssr49305 5 137030668 to 137030692 24 + TSS region transcription start site region 49305
Tssr53886 5 137032410 to 137032442 32 - TSS region transcription start site region 53886
Ap1s1 5 137034993 to 137046060 11067 - protein coding gene adaptor protein complex AP-1, sigma 1
Cpgi16812 5 137045576 to 137046382 806 CpG island CpG island 16812
Tssr53887 5 137046026 to 137046085 59 - TSS region transcription start site region 53887
Tssr49306 5 137046142 to 137046178 36 + TSS region transcription start site region 49306
D5Mit168 5 137058375 to 137058524 149 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 168
Serpine1 5 137061504 to 137072268 10764 - protein coding gene serine (or cysteine) peptidase inhibitor, clade E, member 1
Tssr53888 5 137061926 to 137061930 4 - TSS region transcription start site region 53888
Tssr53889 5 137062049 to 137062065 16 - TSS region transcription start site region 53889
Tssr53890 5 137062652 to 137062662 10 - TSS region transcription start site region 53890
Tssr53891 5 137062985 to 137063005 20 - TSS region transcription start site region 53891
Tssr53892 5 137063059 to 137063082 23 - TSS region transcription start site region 53892
Tssr53893 5 137066591 to 137066596 5 - TSS region transcription start site region 53893
Tssr53894 5 137066960 to 137066971 11 - TSS region transcription start site region 53894
Tssr49307 5 137066968 to 137066994 26 + TSS region transcription start site region 49307
Tssr53895 5 137067011 to 137067028 17 - TSS region transcription start site region 53895
Tssr53896 5 137067882 to 137067894 12 - TSS region transcription start site region 53896
Tssr53897 5 137069420 to 137069444 24 - TSS region transcription start site region 53897
Tssr53898 5 137071128 to 137071137 9 - TSS region transcription start site region 53898
Tssr53899 5 137071232 to 137071249 17 - TSS region transcription start site region 53899
Tssr53900 5 137072261 to 137072277 16 - TSS region transcription start site region 53900