Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:136987002-137020547

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Znhit1 5 136982194 to 136987959 5765 - protein coding gene zinc finger, HIT domain containing 1
Cpgi16808 5 136986662 to 136988170 1508 CpG island CpG island 16808
Plod3 5 136987019 to 136996646 9627 + protein coding gene procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
Tssr49296 5 136987357 to 136987383 26 + TSS region transcription start site region 49296
Tssr49297 5 136987388 to 136987414 26 + TSS region transcription start site region 49297
Tssr49298 5 136987417 to 136987430 13 + TSS region transcription start site region 49298
Tssr49299 5 136987443 to 136987459 16 + TSS region transcription start site region 49299
Tssr49300 5 136987472 to 136987482 10 + TSS region transcription start site region 49300
Tssr53879 5 136987501 to 136987569 68 - TSS region transcription start site region 53879
Tssr49301 5 136987584 to 136987642 58 + TSS region transcription start site region 49301
Tssr49302 5 136987657 to 136987668 11 + TSS region transcription start site region 49302
Tssr53880 5 136987681 to 136987696 15 - TSS region transcription start site region 53880
Tssr53881 5 136987701 to 136987714 13 - TSS region transcription start site region 53881
Tssr53882 5 136987757 to 136987768 11 - TSS region transcription start site region 53882
Tssr53883 5 136987784 to 136987801 17 - TSS region transcription start site region 53883
Tssr53884 5 136987818 to 136987829 11 - TSS region transcription start site region 53884
Tssr53885 5 136987856 to 136987866 10 - TSS region transcription start site region 53885
Mir702 5 136991433 to 136991541 108 + miRNA gene microRNA 702
Gm7284 5 136997962 to 136999452 1490 + pseudogene predicted gene 7284
Gm26989 5 137002002 to 137005547 3545 + pseudogene predicted gene, 26989
D5Mit97 5 137003596 to 137003722 126 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 97