MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:136928689-136978693

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4933404O12Rik	5	136919146 to 136937109	17963	+	lincRNA gene	RIKEN cDNA 4933404O12 gene
Tssr49284	5	136932938 to 136932958	20	+	TSS region	transcription start site region 49284
Cpgi16806	5	136952885 to 136953335	450		CpG island	CpG island 16806
Tssr49285	5	136953246 to 136953325	79	+	TSS region	transcription start site region 49285
Fis1	5	136953275 to 136966234	12959	+	protein coding gene	fission, mitochondrial 1
Tssr49286	5	136953689 to 136953693	4	+	TSS region	transcription start site region 49286
Tssr53877	5	136956699 to 136956709	10	-	TSS region	transcription start site region 53877
Cpgi16807	5	136962017 to 136962516	499		CpG island	CpG island 16807
Tssr49287	5	136962081 to 136962129	48	+	TSS region	transcription start site region 49287
Tssr49288	5	136967815 to 136967826	11	+	TSS region	transcription start site region 49288
Tssr49289	5	136967827 to 136967840	13	+	TSS region	transcription start site region 49289
Tssr49290	5	136967859 to 136967875	16	+	TSS region	transcription start site region 49290
Cldn15	5	136967869 to 136975845	7976	+	protein coding gene	claudin 15
Tssr49291	5	136967896 to 136967907	11	+	TSS region	transcription start site region 49291
Tssr49292	5	136967909 to 136967924	15	+	TSS region	transcription start site region 49292
Tssr49293	5	136967930 to 136967941	11	+	TSS region	transcription start site region 49293
Tssr49294	5	136973911 to 136973929	18	+	TSS region	transcription start site region 49294
Tssr49295	5	136978076 to 136978078	2	+	TSS region	transcription start site region 49295