MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:135850657-135900763

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Srrm3	5	135806890 to 135874772	67882	+	protein coding gene	serine/arginine repetitive matrix 3
Tssr49196	5	135851420 to 135851451	31	+	TSS region	transcription start site region 49196
Cpgi16766	5	135851955 to 135852566	611		CpG island	CpG island 16766
Cpgi16767	5	135856874 to 135857512	638		CpG island	CpG island 16767
Tssr49197	5	135862854 to 135862859	5	+	TSS region	transcription start site region 49197
Tssr49198	5	135863020 to 135863032	12	+	TSS region	transcription start site region 49198
Tssr49199	5	135863042 to 135863054	12	+	TSS region	transcription start site region 49199
Cpgi16768	5	135867683 to 135869355	1672		CpG island	CpG island 16768
Cpgi16769	5	135873085 to 135873268	183		CpG island	CpG island 16769
Gm22450	5	135875657 to 135875763	106	+	snRNA gene	predicted gene, 22450
Cpgi16770	5	135887710 to 135888086	376		CpG island	CpG island 16770
Tssr49200	5	135887905 to 135887923	18	+	TSS region	transcription start site region 49200
Hspb1	5	135887919 to 135889563	1644	+	protein coding gene	heat shock protein 1
Tssr49201	5	135887940 to 135887970	30	+	TSS region	transcription start site region 49201
Tssr49202	5	135887975 to 135887986	11	+	TSS region	transcription start site region 49202
Tssr49203	5	135887988 to 135888011	23	+	TSS region	transcription start site region 49203
Cpgi16771	5	135888410 to 135888874	464		CpG island	CpG island 16771
Tssr49204	5	135889038 to 135889042	4	+	TSS region	transcription start site region 49204
Gm42533	5	135896330 to 135896486	156	-	pseudogene	predicted gene 42533