Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:135835657-135915763

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Srrm3 5 135806890 to 135874772 67882 + protein coding gene serine/arginine repetitive matrix 3
Gm23268 5 135837295 to 135837372 77 - miRNA gene predicted gene, 23268
Srrm3os 5 135843057 to 135844946 1889 - antisense lncRNA gene serine/arginine repetitive matrix 3, opposite strand
Tssr49196 5 135851420 to 135851451 31 + TSS region transcription start site region 49196
Cpgi16766 5 135851955 to 135852566 611 CpG island CpG island 16766
Cpgi16767 5 135856874 to 135857512 638 CpG island CpG island 16767
Tssr49197 5 135862854 to 135862859 5 + TSS region transcription start site region 49197
Tssr49198 5 135863020 to 135863032 12 + TSS region transcription start site region 49198
Tssr49199 5 135863042 to 135863054 12 + TSS region transcription start site region 49199
Cpgi16768 5 135867683 to 135869355 1672 CpG island CpG island 16768
Cpgi16769 5 135873085 to 135873268 183 CpG island CpG island 16769
Gm22450 5 135875657 to 135875763 106 + snRNA gene predicted gene, 22450
Cpgi16770 5 135887710 to 135888086 376 CpG island CpG island 16770
Tssr49200 5 135887905 to 135887923 18 + TSS region transcription start site region 49200
Hspb1 5 135887919 to 135889563 1644 + protein coding gene heat shock protein 1
Tssr49201 5 135887940 to 135887970 30 + TSS region transcription start site region 49201
Tssr49202 5 135887975 to 135887986 11 + TSS region transcription start site region 49202
Tssr49203 5 135887988 to 135888011 23 + TSS region transcription start site region 49203
Cpgi16771 5 135888410 to 135888874 464 CpG island CpG island 16771
Tssr49204 5 135889038 to 135889042 4 + TSS region transcription start site region 49204
Gm42533 5 135896330 to 135896486 156 - pseudogene predicted gene 42533
Cpgi16772 5 135903551 to 135904008 457 CpG island CpG island 16772
Ywhag 5 135908409 to 135934616 26207 - protein coding gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide
Tssr53763 5 135908888 to 135909006 118 - TSS region transcription start site region 53763
Tssr53764 5 135909234 to 135909250 16 - TSS region transcription start site region 53764
Tssr53765 5 135909471 to 135909486 15 - TSS region transcription start site region 53765
Tssr53766 5 135910140 to 135910166 26 - TSS region transcription start site region 53766
Tssr53767 5 135910580 to 135910598 18 - TSS region transcription start site region 53767
Tssr53768 5 135910618 to 135910655 37 - TSS region transcription start site region 53768
Tssr53769 5 135910681 to 135910692 11 - TSS region transcription start site region 53769
Tssr53770 5 135910781 to 135910794 13 - TSS region transcription start site region 53770
Tssr53771 5 135910870 to 135910887 17 - TSS region transcription start site region 53771
Tssr53772 5 135910888 to 135910912 24 - TSS region transcription start site region 53772
Tssr53773 5 135911304 to 135911322 18 - TSS region transcription start site region 53773
Tssr53774 5 135911346 to 135911360 14 - TSS region transcription start site region 53774
Tssr53775 5 135911448 to 135911466 18 - TSS region transcription start site region 53775
Tssr53776 5 135911473 to 135911484 11 - TSS region transcription start site region 53776
Tssr53777 5 135911546 to 135911558 12 - TSS region transcription start site region 53777
Tssr53778 5 135911570 to 135911583 13 - TSS region transcription start site region 53778