Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:135624572-135724592

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16759 5 135632487 to 135633113 626 CpG island CpG island 16759
Tssr49164 5 135632638 to 135632647 9 + TSS region transcription start site region 49164
Rhbdd2 5 135632654 to 135646376 13722 + protein coding gene rhomboid domain containing 2
Tssr49165 5 135632681 to 135632694 13 + TSS region transcription start site region 49165
Tssr49166 5 135632696 to 135632727 31 + TSS region transcription start site region 49166
Gm15607 5 135637139 to 135637496 357 - pseudogene predicted gene 15607
Tssr49167 5 135640808 to 135640812 4 + TSS region transcription start site region 49167
Gm21839 5 135643955 to 135644336 381 - pseudogene predicted gene, 21839
Gm43091 5 135653810 to 135672987 19177 - lincRNA gene predicted gene 43091
Tssr49168 5 135669977 to 135669984 7 + TSS region transcription start site region 49168
Tssr49169 5 135670027 to 135670042 15 + TSS region transcription start site region 49169
Por 5 135670040 to 135735326 65286 + protein coding gene P450 (cytochrome) oxidoreductase
Tssr49170 5 135671494 to 135671500 6 + TSS region transcription start site region 49170
Tssr49171 5 135674572 to 135674592 20 + TSS region transcription start site region 49171
Tssr49172 5 135685750 to 135685754 4 + TSS region transcription start site region 49172
Gm40345 5 135685941 to 135687772 1831 - lncRNA gene predicted gene, 40345
Cpgi16760 5 135688566 to 135689594 1028 CpG island CpG island 16760
Tssr49173 5 135689183 to 135689213 30 + TSS region transcription start site region 49173
Tssr49174 5 135697251 to 135697254 3 + TSS region transcription start site region 49174
Gm16061 5 135698163 to 135699019 856 - pseudogene predicted gene 16061
Tssr53755 5 135713476 to 135713497 21 - TSS region transcription start site region 53755
Tssr53756 5 135713515 to 135713523 8 - TSS region transcription start site region 53756
D5Mit60 5 135715435 to 135715564 129 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 60
Tssr49175 5 135715978 to 135715999 21 + TSS region transcription start site region 49175