Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134961016-135011033

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16733 5 134965884 to 134966552 668 CpG island CpG island 16733
Tssr53707 5 134966479 to 134966492 13 - TSS region transcription start site region 53707
Tssr53708 5 134966504 to 134966514 10 - TSS region transcription start site region 53708
Tssr49111 5 134966843 to 134966863 20 + TSS region transcription start site region 49111
Cpgi16734 5 134985702 to 134987352 1650 CpG island CpG island 16734
Tssr49112 5 134986016 to 134986033 17 + TSS region transcription start site region 49112
Tssr49113 5 134986169 to 134986172 3 + TSS region transcription start site region 49113
Tssr49114 5 134986191 to 134986270 79 + TSS region transcription start site region 49114
Cldn3 5 134986214 to 134987472 1258 + protein coding gene claudin 3
Tssr49115 5 134986276 to 134986292 16 + TSS region transcription start site region 49115
Tssr49116 5 134986302 to 134986323 21 + TSS region transcription start site region 49116
Tssr49117 5 134986820 to 134986833 13 + TSS region transcription start site region 49117
Tssr49118 5 134987140 to 134987163 23 + TSS region transcription start site region 49118
Wbscr25 5 134987433 to 135001350 13917 - antisense lncRNA gene Williams Beuren syndrome chromosome region 25 (human)
Tssr49119 5 134990036 to 134990042 6 + TSS region transcription start site region 49119
Tssr53709 5 135000757 to 135000762 5 - TSS region transcription start site region 53709
Tssr53710 5 135000854 to 135000861 7 - TSS region transcription start site region 53710
Tssr53711 5 135000933 to 135000943 10 - TSS region transcription start site region 53711
Tssr53712 5 135001280 to 135001285 5 - TSS region transcription start site region 53712
Tssr53713 5 135001288 to 135001361 73 - TSS region transcription start site region 53713
Tssr53714 5 135001365 to 135001376 11 - TSS region transcription start site region 53714
Cpgi16735 5 135001397 to 135001588 191 CpG island CpG island 16735
Rps29-ps 5 135006577 to 135006748 171 + pseudogene ribosomal protein S29, pseudogene
Gm43372 5 135007093 to 135010108 3015 - unclassified gene predicted gene 43372
Cpgi16736 5 135008600 to 135010174 1574 CpG island CpG island 16736
Tssr53715 5 135008809 to 135008830 21 - TSS region transcription start site region 53715
Tssr53716 5 135008838 to 135008860 22 - TSS region transcription start site region 53716
Abhd11 5 135009152 to 135012175 3023 + protein coding gene abhydrolase domain containing 11
Tssr49120 5 135009307 to 135009317 10 + TSS region transcription start site region 49120
Tssr49121 5 135009438 to 135009453 15 + TSS region transcription start site region 49121
Tssr49122 5 135009633 to 135009699 66 + TSS region transcription start site region 49122
Tssr49123 5 135009700 to 135009726 26 + TSS region transcription start site region 49123
Tssr49124 5 135009748 to 135009765 17 + TSS region transcription start site region 49124
Tssr49125 5 135009767 to 135009776 9 + TSS region transcription start site region 49125
Tssr49126 5 135009834 to 135009845 11 + TSS region transcription start site region 49126
Tssr49127 5 135009890 to 135009901 11 + TSS region transcription start site region 49127
Tssr49128 5 135009932 to 135010014 82 + TSS region transcription start site region 49128
Tssr1661 5 135010021 to 135010032 11 + TSS region transcription start site region 1661