Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134912671-134952688

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cldn13 5 134914249 to 134915526 1277 - protein coding gene claudin 13
Tssr1659 5 134915385 to 134915406 21 - TSS region transcription start site region 1659
Tssr53695 5 134915470 to 134915486 16 - TSS region transcription start site region 53695
Tssr53696 5 134915494 to 134915505 11 - TSS region transcription start site region 53696
Tssr53697 5 134915512 to 134915542 30 - TSS region transcription start site region 53697
4933439J24Rik 5 134919788 to 134920640 852 + lincRNA gene RIKEN cDNA 4933439J24 gene
9030607J07Rik 5 134929848 to 134931469 1621 - lncRNA gene RIKEN cDNA 9030607J07 gene
Cpgi16730 5 134932194 to 134932890 696 CpG island CpG island 16730
Tssr49105 5 134932351 to 134932382 31 + TSS region transcription start site region 49105
Mettl27 5 134932368 to 134942637 10269 + protein coding gene methyltransferase like 27
Tssr49106 5 134932395 to 134932422 27 + TSS region transcription start site region 49106
Tssr53698 5 134932671 to 134932688 17 - TSS region transcription start site region 53698
Tssr1660 5 134938452 to 134938453 1 + TSS region transcription start site region 1660
Cldn4 5 134945123 to 134946934 1811 - protein coding gene claudin 4
Tssr49107 5 134945126 to 134945130 4 + TSS region transcription start site region 49107
Tssr53699 5 134945251 to 134945258 7 - TSS region transcription start site region 53699
Tssr49108 5 134945268 to 134945307 39 + TSS region transcription start site region 49108
Tssr53700 5 134945816 to 134945836 20 - TSS region transcription start site region 53700
Tssr53701 5 134946021 to 134946031 10 - TSS region transcription start site region 53701
Cpgi16731 5 134946085 to 134946772 687 CpG island CpG island 16731
Tssr49109 5 134946119 to 134946181 62 + TSS region transcription start site region 49109
Tssr53702 5 134946255 to 134946271 16 - TSS region transcription start site region 53702
Tssr53703 5 134946439 to 134946443 4 - TSS region transcription start site region 53703
Tssr53704 5 134946896 to 134946906 10 - TSS region transcription start site region 53704
Tssr53705 5 134946917 to 134946945 28 - TSS region transcription start site region 53705
Tssr53706 5 134951118 to 134951145 27 - TSS region transcription start site region 53706
Cpgi16732 5 134951798 to 134951961 163 CpG island CpG island 16732