Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134589473-134689480

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(5Gtf2i-Limk1)1Uta 5 134237834 to 134688598 450764 chromosomal deletion deletion, Chr 5, Uta Francke 1
Rfc2 5 134582690 to 134598328 15638 + protein coding gene replication factor C (activator 1) 2
Lat2 5 134600022 to 134615025 15003 - protein coding gene linker for activation of T cells family, member 2
Tssr49094 5 134600238 to 134600288 50 + TSS region transcription start site region 49094
Tssr53654 5 134607314 to 134607319 5 - TSS region transcription start site region 53654
Tssr53655 5 134611858 to 134611876 18 - TSS region transcription start site region 53655
Tssr53656 5 134611885 to 134611897 12 - TSS region transcription start site region 53656
Tssr49095 5 134612008 to 134612051 43 + TSS region transcription start site region 49095
Tssr49096 5 134613943 to 134613956 13 + TSS region transcription start site region 49096
Tssr49097 5 134613991 to 134613999 8 + TSS region transcription start site region 49097
Tssr53657 5 134614953 to 134615029 76 - TSS region transcription start site region 53657
Eif4h 5 134619872 to 134639409 19537 - protein coding gene eukaryotic translation initiation factor 4H
Tssr53658 5 134627707 to 134627750 43 - TSS region transcription start site region 53658
Tssr53659 5 134631785 to 134631787 2 - TSS region transcription start site region 53659
Cpgi16725 5 134638505 to 134639873 1368 CpG island CpG island 16725
Tssr53660 5 134639028 to 134639044 16 - TSS region transcription start site region 53660
Tssr53661 5 134639311 to 134639348 37 - TSS region transcription start site region 53661
Tssr53662 5 134639473 to 134639480 7 - TSS region transcription start site region 53662
Tssr53663 5 134639486 to 134639522 36 - TSS region transcription start site region 53663
Tssr53664 5 134639541 to 134639546 5 - TSS region transcription start site region 53664
Del(5Limk1-Trim50)2Uta 5 134656039 to 135368005 711966 chromosomal deletion deletion, Chr 5, Uta Francke 2
Limk1 5 134656039 to 134688598 32559 - protein coding gene LIM-domain containing, protein kinase
Tssr53665 5 134657533 to 134657582 49 - TSS region transcription start site region 53665
Tssr53666 5 134670367 to 134670395 28 - TSS region transcription start site region 53666
Gm10369 5 134676490 to 134680145 3655 + antisense lncRNA gene predicted gene 10369
Tssr49098 5 134676544 to 134676563 19 + TSS region transcription start site region 49098
Tssr49099 5 134676689 to 134676713 24 + TSS region transcription start site region 49099
Tssr53667 5 134678190 to 134678254 64 - TSS region transcription start site region 53667
Cpgi16726 5 134688058 to 134689388 1330 CpG island CpG island 16726
Tssr53668 5 134688556 to 134688563 7 - TSS region transcription start site region 53668
Tssr53669 5 134688568 to 134688587 19 - TSS region transcription start site region 53669
Tssr53670 5 134688595 to 134688637 42 - TSS region transcription start site region 53670
Tssr53671 5 134688639 to 134688650 11 - TSS region transcription start site region 53671