Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:131538686-131968697

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16707 5 131537100 to 131539075 1975 CpG island CpG island 16707
Tssr53563 5 131538688 to 131538717 29 - TSS region transcription start site region 53563
Tssr53564 5 131538737 to 131538749 12 - TSS region transcription start site region 53564
Gm27266 5 131577987 to 131578109 122 + rRNA gene predicted gene, 27266
Tssr1652 5 131586518 to 131586520 2 + TSS region transcription start site region 1652
9330177L23Rik 5 131593811 to 131594910 1099 unclassified non-coding RNA gene RIKEN cDNA 9330177L23 gene
Tssr53565 5 131594879 to 131594880 1 - TSS region transcription start site region 53565
Gm42589 5 131603654 to 131605404 1750 - unclassified gene predicted gene 42589
Gm42588 5 131608297 to 131609593 1296 - unclassified gene predicted gene 42588
2810432F15Rik 5 131615438 to 131625087 9649 + antisense lncRNA gene RIKEN cDNA 2810432F15 gene
Cpgi16708 5 131616219 to 131616777 558 CpG island CpG island 16708
Tssr53566 5 131616458 to 131616473 15 - TSS region transcription start site region 53566
Tssr53567 5 131616559 to 131616570 11 - TSS region transcription start site region 53567
Tssr53568 5 131616599 to 131616611 12 - TSS region transcription start site region 53568
Tssr53569 5 131616741 to 131616767 26 - TSS region transcription start site region 53569
Gm42591 5 131624842 to 131625541 699 - unclassified gene predicted gene 42591
Gm43483 5 131639948 to 131642807 2859 - unclassified gene predicted gene 43483
Gm42443 5 131694721 to 131695875 1154 - unclassified gene predicted gene 42443
Gm42442 5 131697221 to 131698353 1132 - unclassified gene predicted gene 42442
Tssr49075 5 131753686 to 131753697 11 + TSS region transcription start site region 49075
Cpgi16709 5 131819398 to 131819633 235 CpG island CpG island 16709
4930563F08Rik 5 131880269 to 131883768 3499 + antisense lncRNA gene RIKEN cDNA 4930563F08 gene
C230071H17Rik 5 131882966 to 131885938 2972 - unclassified gene RIKEN cDNA C230071H17 gene
Tssr53570 5 131885915 to 131885919 4 - TSS region transcription start site region 53570
Gm42441 5 131905695 to 131906442 747 - unclassified gene predicted gene 42441
Tssr53571 5 131930584 to 131930587 3 - TSS region transcription start site region 53571
Gm42440 5 131932396 to 131934679 2283 - unclassified gene predicted gene 42440
Tssr53572 5 131950608 to 131950616 8 - TSS region transcription start site region 53572
Gm42439 5 131954992 to 131965007 10015 + antisense lncRNA gene predicted gene 42439
Gm42438 5 131957592 to 131958565 973 - unclassified gene predicted gene 42438
Tssr53573 5 131963908 to 131963912 4 - TSS region transcription start site region 53573
Tssr53574 5 131964724 to 131964731 7 - TSS region transcription start site region 53574
Tssr53575 5 131966089 to 131966092 3 - TSS region transcription start site region 53575