Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:131057439-131557454

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Galnt17 5 130874951 to 131307522 432571 - protein coding gene polypeptide N-acetylgalactosaminyltransferase 17
Cpgi16704 5 131081546 to 131081866 320 CpG island CpG island 16704
Gm40338 5 131084677 to 131088807 4130 + lncRNA gene predicted gene, 40338
Tssr1650 5 131095770 to 131095812 42 - TSS region transcription start site region 1650
Gm43166 5 131130021 to 131134711 4690 - sense intronic lncRNA gene predicted gene 43166
Tssr53546 5 131168579 to 131168580 1 - TSS region transcription start site region 53546
Tssr53547 5 131245962 to 131245966 4 - TSS region transcription start site region 53547
Tssr53548 5 131290046 to 131290050 4 - TSS region transcription start site region 53548
Cpgi16705 5 131306222 to 131308174 1952 CpG island CpG island 16705
Tssr53549 5 131307254 to 131307294 40 - TSS region transcription start site region 53549
Tssr53550 5 131307439 to 131307454 15 - TSS region transcription start site region 53550
Tssr53551 5 131307700 to 131307726 26 - TSS region transcription start site region 53551
Tssr53552 5 131307848 to 131307932 84 - TSS region transcription start site region 53552
Tssr53553 5 131308094 to 131308120 26 - TSS region transcription start site region 53553
Gm29681 5 131391600 to 131414718 23118 - lincRNA gene predicted gene, 29681
D5Mit262 5 131418487 to 131418617 130 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 262
Auts2 5 131437682 to 132542343 1104661 - protein coding gene autism susceptibility candidate 2
Tssr53554 5 131438810 to 131438822 12 - TSS region transcription start site region 53554
Cpgi16706 5 131439459 to 131440630 1171 CpG island CpG island 16706
Tssr1651 5 131472371 to 131472388 17 - TSS region transcription start site region 1651
Tssr53555 5 131472396 to 131472418 22 - TSS region transcription start site region 53555
Tssr53556 5 131476668 to 131476698 30 - TSS region transcription start site region 53556
Tssr49074 5 131494875 to 131494880 5 + TSS region transcription start site region 49074
Tssr53557 5 131495772 to 131495779 7 - TSS region transcription start site region 53557
3110001N23Rik 5 131524950 to 131525662 712 unclassified gene RIKEN cDNA 3110001N23 gene
Cpgi16707 5 131537100 to 131539075 1975 CpG island CpG island 16707
Tssr53558 5 131537759 to 131537791 32 - TSS region transcription start site region 53558
Tssr53559 5 131537939 to 131537963 24 - TSS region transcription start site region 53559
Tssr53560 5 131538155 to 131538237 82 - TSS region transcription start site region 53560
Tssr53561 5 131538634 to 131538641 7 - TSS region transcription start site region 53561
Tssr53562 5 131538673 to 131538684 11 - TSS region transcription start site region 53562
Tssr53563 5 131538688 to 131538717 29 - TSS region transcription start site region 53563
Tssr53564 5 131538737 to 131538749 12 - TSS region transcription start site region 53564