Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:129680375-129780548

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr53487 5 129682320 to 129682323 3 - TSS region transcription start site region 53487
Sept14 5 129683391 to 129708511 25120 - protein coding gene septin 14
Tssr1646 5 129704950 to 129704953 3 - TSS region transcription start site region 1646
Tssr53488 5 129704964 to 129704989 25 - TSS region transcription start site region 53488
Cpgi16676 5 129715362 to 129715850 488 CpG island CpG island 16676
Mrps17 5 129715441 to 129718712 3271 + protein coding gene mitochondrial ribosomal protein S17
Tssr49009 5 129715488 to 129715539 51 + TSS region transcription start site region 49009
Cpgi16677 5 129724735 to 129725959 1224 CpG island CpG island 16677
Nipsnap2 5 129725063 to 129758327 33264 + protein coding gene nipsnap homolog 2
Tssr49010 5 129725081 to 129725143 62 + TSS region transcription start site region 49010
Tssr49011 5 129727043 to 129727055 12 + TSS region transcription start site region 49011
Gm15903 5 129727046 to 129731689 4643 + sense intronic lncRNA gene predicted gene 15903
Cpgi16678 5 129730375 to 129730548 173 CpG island CpG island 16678
Tssr49012 5 129747017 to 129747037 20 + TSS region transcription start site region 49012
Tssr49013 5 129755681 to 129755715 34 + TSS region transcription start site region 49013
Tssr49014 5 129757631 to 129757635 4 + TSS region transcription start site region 49014
Psph 5 129765558 to 129787253 21695 - protein coding gene phosphoserine phosphatase
Cpgi16679 5 129778858 to 129779440 582 CpG island CpG island 16679
Tssr53489 5 129779119 to 129779131 12 - TSS region transcription start site region 53489
Tssr53490 5 129779175 to 129779186 11 - TSS region transcription start site region 53490
Tssr53491 5 129779204 to 129779283 79 - TSS region transcription start site region 53491