MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:129203562-129524721

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Adgrd1	5	129096750 to 129204599	107849	+	protein coding gene	adhesion G protein-coupled receptor D1
Tssr49002	5	129204327 to 129204332	5	+	TSS region	transcription start site region 49002
D5Mit427	5	129212105 to 129212215	110		DNA segment	DNA Segment, Chr 5, Massachusetts Institute of Technology 427
Tssr49003	5	129234182 to 129234186	4	+	TSS region	transcription start site region 49003
Tssr49004	5	129235034 to 129235038	4	+	TSS region	transcription start site region 49004
D5Mit339	5	129242998 to 129243112	114		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 339
Cpgi16671	5	129264498 to 129264667	169		CpG island	CpG island 16671
Gm34145	5	129306596 to 129308013	1417	-	lncRNA gene	predicted gene, 34145
Tssr49005	5	129363543 to 129363581	38	+	TSS region	transcription start site region 49005
Gm43001	5	129363562 to 129364721	1159	+	lincRNA gene	predicted gene 43001
Gm34468	5	129493231 to 129497417	4186	+	lncRNA gene	predicted gene, 34468
Gm40333	5	129493873 to 129494379	506	-	lncRNA gene	predicted gene, 40333
Gm40332	5	129500250 to 129501163	913	-	lncRNA gene	predicted gene, 40332
Cpgi16672	5	129500747 to 129502293	1546		CpG island	CpG island 16672
Tssr49006	5	129501223 to 129501253	30	+	TSS region	transcription start site region 49006
Sfswap	5	129501231 to 129571384	70153	+	protein coding gene	splicing factor SWAP
Tssr49007	5	129511179 to 129511182	3	+	TSS region	transcription start site region 49007