Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:128471585-128722956

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16660 5 128482763 to 128483081 318 CpG island CpG island 16660
4930573I07Rik 5 128516115 to 128517634 1519 - lincRNA gene RIKEN cDNA 4930573I07 gene
Gm42499 5 128520221 to 128521632 1411 + unclassified gene predicted gene 42499
D5Mit321 5 128536439 to 128536537 98 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 321
Gm38612 5 128570190 to 128576533 6343 + lncRNA gene predicted gene, 38612
Tssr48977 5 128570733 to 128570753 20 + TSS region transcription start site region 48977
Cpgi16661 5 128577820 to 128578067 247 CpG island CpG island 16661
5930412G12Rik 5 128579130 to 128600687 21557 - lincRNA gene RIKEN cDNA 5930412G12 gene
Tssr1642 5 128585353 to 128585355 2 + TSS region transcription start site region 1642
Gm42498 5 128596585 to 128597956 1371 - unclassified gene predicted gene 42498
Tssr48978 5 128596904 to 128596924 20 + TSS region transcription start site region 48978
Cpgi16662 5 128596959 to 128597204 245 CpG island CpG island 16662
Cpgi16663 5 128599739 to 128602521 2782 CpG island CpG island 16663
Tssr53469 5 128600642 to 128600673 31 - TSS region transcription start site region 53469
Tssr53470 5 128600674 to 128600706 32 - TSS region transcription start site region 53470
Tssr48979 5 128600800 to 128600816 16 + TSS region transcription start site region 48979
Tssr48980 5 128600821 to 128600828 7 + TSS region transcription start site region 48980
Tssr48981 5 128600830 to 128600848 18 + TSS region transcription start site region 48981
Fzd10 5 128601106 to 128604093 2987 + protein coding gene frizzled class receptor 10
Tssr48982 5 128603660 to 128603665 5 + TSS region transcription start site region 48982
Gm33931 5 128644147 to 128656806 12659 - lncRNA gene predicted gene, 33931
Cpgi16664 5 128667772 to 128668104 332 CpG island CpG island 16664
Gm33995 5 128705420 to 128709399 3979 - lncRNA gene predicted gene, 33995
Tssr1643 5 128717447 to 128717450 3 + TSS region transcription start site region 1643