Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:125393858-125454121

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
oar 5 119880432 to 125451502 5571070 heritable phenotypic marker oarleg
Tssr48934 5 125394433 to 125394449 16 + TSS region transcription start site region 48934
Cpgi16642 5 125402776 to 125402932 156 CpG island CpG island 16642
n-TAtgc10 5 125404250 to 125404321 71 - tRNA gene nuclear encoded tRNA alanine 10 (anticodon TGC)
Cpgi16643 5 125405152 to 125405519 367 CpG island CpG island 16643
n-TDgtc15 5 125405607 to 125405678 71 - tRNA gene nuclear encoded tRNA aspartic acid 15 (anticodon GTC)
n-TFgaa7 5 125406055 to 125406127 72 - tRNA gene nuclear encoded tRNA pheylalanine 7 (anticodon GAA)
n-TDgtc14 5 125409016 to 125409087 71 - tRNA gene nuclear encoded tRNA aspartic acid 14 (anticodon GTC)
n-TAtgc5 5 125409472 to 125409543 71 + tRNA gene nuclear encoded tRNA alanine 5 (anticodon TGC)
Dhx37 5 125413858 to 125434121 20263 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 37
Cpgi16644 5 125433587 to 125434326 739 CpG island CpG island 16644
Tssr53454 5 125434053 to 125434131 78 - TSS region transcription start site region 53454
Gm43752 5 125435075 to 125435771 696 + pseudogene predicted gene 43752
Cpgi16645 5 125441273 to 125442351 1078 CpG island CpG island 16645
Tssr48935 5 125441546 to 125441614 68 + TSS region transcription start site region 48935
Bri3bp 5 125441568 to 125460370 18802 + protein coding gene Bri3 binding protein
Tssr48936 5 125441618 to 125441667 49 + TSS region transcription start site region 48936
Tssr48937 5 125441673 to 125441674 1 + TSS region transcription start site region 48937
Tssr48938 5 125442111 to 125442123 12 + TSS region transcription start site region 48938
D5Mit139 5 125451321 to 125451502 181 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 139