MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:125155836-125276274

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ncor2	5	125017153 to 125179219	162066	-	protein coding gene	nuclear receptor co-repressor 2
Tssr48919	5	125158438 to 125158444	6	+	TSS region	transcription start site region 48919
Cpgi16633	5	125176835 to 125177079	244		CpG island	CpG island 16633
Cpgi16634	5	125177504 to 125179878	2374		CpG island	CpG island 16634
Tssr53411	5	125179140 to 125179147	7	-	TSS region	transcription start site region 53411
Tssr53412	5	125179155 to 125179229	74	-	TSS region	transcription start site region 53412
Cpgi16635	5	125215836 to 125216274	438		CpG island	CpG island 16635
Gm32585	5	125238314 to 125252407	14093	-	lincRNA gene	predicted gene, 32585
D5Mit173.1	5	125243682 to 125243824	142		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 173.1
D5Mit173	5	125243794 to 125243965	171		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 173
Cpgi16636	5	125245579 to 125246095	516		CpG island	CpG island 16636
Tssr53413	5	125245779 to 125245794	15	-	TSS region	transcription start site region 53413
Tssr53414	5	125245806 to 125245815	9	-	TSS region	transcription start site region 53414
Tssr53415	5	125245817 to 125245828	11	-	TSS region	transcription start site region 53415
Tssr53416	5	125245838 to 125245849	11	-	TSS region	transcription start site region 53416
Tssr48920	5	125249627 to 125249630	3	+	TSS region	transcription start site region 48920
Tssr1636	5	125267243 to 125267244	1	+	TSS region	transcription start site region 1636
Cpgi16637	5	125267477 to 125267670	193		CpG island	CpG island 16637