Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:124591997-124855079

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gtf2h3 5 124579148 to 124597680 18532 + protein coding gene general transcription factor IIH, polypeptide 3
Cpgi16620 5 124598555 to 124599290 735 CpG island CpG island 16620
Tctn2 5 124598749 to 124627738 28989 + protein coding gene tectonic family member 2
Tssr48909 5 124598752 to 124598798 46 + TSS region transcription start site region 48909
D5Mit279 5 124601675 to 124601797 122 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 279
Cpgi16621 5 124628892 to 124629820 928 CpG island CpG island 16621
Tssr48910 5 124629050 to 124629097 47 + TSS region transcription start site region 48910
Atp6v0a2 5 124629052 to 124724455 95403 + protein coding gene ATPase, H+ transporting, lysosomal V0 subunit A2
Tssr48911 5 124629099 to 124629113 14 + TSS region transcription start site region 48911
Tssr48912 5 124637488 to 124637501 13 + TSS region transcription start site region 48912
Tssr1635 5 124637504 to 124637524 20 + TSS region transcription start site region 1635
Gm24854 5 124717077 to 124717174 97 - snRNA gene predicted gene, 24854
4930404A12Rik 5 124721997 to 124725079 3082 - antisense lncRNA gene RIKEN cDNA 4930404A12 gene
Cpgi16622 5 124724945 to 124725514 569 CpG island CpG island 16622
Dnah10 5 124725085 to 124834308 109223 + protein coding gene dynein, axonemal, heavy chain 10
Tssr48913 5 124725119 to 124725137 18 + TSS region transcription start site region 48913
Tssr48914 5 124796372 to 124796375 3 + TSS region transcription start site region 48914
Gm43777 5 124817801 to 124818312 511 - antisense lncRNA gene predicted gene 43777
Trigq4 5 124829235 to 124829348 113 QTL triglyceride QTL 4
D5Mit95 5 124829235 to 124829348 113 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 95
Chlq11 5 124829235 to 124829348 113 QTL circulating hormone level QTL 11
Ahl20 5 124829235 to 124829348 113 QTL age related hearing loss, early onset 20
Ccdc92 5 124834432 to 124862221 27789 - protein coding gene coiled-coil domain containing 92
Cpgi16623 5 124835295 to 124835793 498 CpG island CpG island 16623