Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:124579052-124774455

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif2b1 5 124570214 to 124579131 8917 - protein coding gene eukaryotic translation initiation factor 2B, subunit 1 (alpha)
Cpgi16619 5 124578684 to 124579694 1010 CpG island CpG island 16619
Tssr53376 5 124579045 to 124579075 30 - TSS region transcription start site region 53376
Tssr53377 5 124579083 to 124579095 12 - TSS region transcription start site region 53377
Tssr48907 5 124579115 to 124579124 9 + TSS region transcription start site region 48907
Tssr48908 5 124579134 to 124579184 50 + TSS region transcription start site region 48908
Gtf2h3 5 124579148 to 124597680 18532 + protein coding gene general transcription factor IIH, polypeptide 3
Cpgi16620 5 124598555 to 124599290 735 CpG island CpG island 16620
Tctn2 5 124598749 to 124627738 28989 + protein coding gene tectonic family member 2
Tssr48909 5 124598752 to 124598798 46 + TSS region transcription start site region 48909
D5Mit279 5 124601675 to 124601797 122 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 279
Cpgi16621 5 124628892 to 124629820 928 CpG island CpG island 16621
Tssr48910 5 124629050 to 124629097 47 + TSS region transcription start site region 48910
Atp6v0a2 5 124629052 to 124724455 95403 + protein coding gene ATPase, H+ transporting, lysosomal V0 subunit A2
Tssr48911 5 124629099 to 124629113 14 + TSS region transcription start site region 48911
Tssr48912 5 124637488 to 124637501 13 + TSS region transcription start site region 48912
Tssr1635 5 124637504 to 124637524 20 + TSS region transcription start site region 1635
Gm24854 5 124717077 to 124717174 97 - snRNA gene predicted gene, 24854
4930404A12Rik 5 124721997 to 124725079 3082 - antisense lncRNA gene RIKEN cDNA 4930404A12 gene
Cpgi16622 5 124724945 to 124725514 569 CpG island CpG island 16622
Dnah10 5 124725085 to 124834308 109223 + protein coding gene dynein, axonemal, heavy chain 10
Tssr48913 5 124725119 to 124725137 18 + TSS region transcription start site region 48913