Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123850820-123910953

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hcar2 5 123863570 to 123865499 1929 - protein coding gene hydroxycarboxylic acid receptor 2
Tssr53276 5 123865444 to 123865451 7 - TSS region transcription start site region 53276
Tssr53277 5 123865462 to 123865473 11 - TSS region transcription start site region 53277
Tssr53278 5 123865483 to 123865488 5 - TSS region transcription start site region 53278
Tssr53279 5 123865491 to 123865518 27 - TSS region transcription start site region 53279
Hcar1 5 123876736 to 123880020 3284 - protein coding gene hydrocarboxylic acid receptor 1
Tssr53280 5 123879992 to 123880012 20 - TSS region transcription start site region 53280
Tssr53281 5 123880030 to 123880039 9 - TSS region transcription start site region 53281
D5Mit1005 5 123880820 to 123880953 133 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 1005
Tssr53282 5 123891789 to 123891808 19 - TSS region transcription start site region 53282
Tssr48806 5 123893816 to 123893827 11 + TSS region transcription start site region 48806
Cpgi16594 5 123906871 to 123907874 1003 CpG island CpG island 16594
Tssr48807 5 123907186 to 123907197 11 + TSS region transcription start site region 48807
Tssr48808 5 123907199 to 123907210 11 + TSS region transcription start site region 48808
Tssr48809 5 123907239 to 123907292 53 + TSS region transcription start site region 48809
Denr 5 123907269 to 123928832 21563 + protein coding gene density-regulated protein
Tssr48810 5 123907294 to 123907315 21 + TSS region transcription start site region 48810
Tssr48811 5 123907376 to 123907387 11 + TSS region transcription start site region 48811
Tssr48812 5 123907522 to 123907560 38 + TSS region transcription start site region 48812
Tssr48813 5 123907562 to 123907571 9 + TSS region transcription start site region 48813
Tssr48814 5 123907572 to 123907587 15 + TSS region transcription start site region 48814
Tssr48815 5 123907596 to 123907607 11 + TSS region transcription start site region 48815
Tssr48816 5 123907622 to 123907633 11 + TSS region transcription start site region 48816
Tssr48817 5 123908082 to 123908114 32 + TSS region transcription start site region 48817
Tssr48818 5 123908178 to 123908188 10 + TSS region transcription start site region 48818
Tssr48819 5 123909090 to 123909108 18 + TSS region transcription start site region 48819
Tssr48820 5 123909124 to 123909133 9 + TSS region transcription start site region 48820
Tssr53283 5 123910493 to 123910537 44 - TSS region transcription start site region 53283