Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123407471-123517508

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
repro2 5 119806972 to 123412074 3605102 heritable phenotypic marker reproductive mutant 2, JAX Reproductive Mutagenesis Program
Mlxip 5 123394798 to 123457932 63134 + protein coding gene MLX interacting protein
Gm43813 5 123406487 to 123411864 5377 + unclassified non-coding RNA gene predicted gene 43813
D5Mit65 5 123411936 to 123412074 138 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 65
Tssr48793 5 123414938 to 123414945 7 + TSS region transcription start site region 48793
Tssr48794 5 123429049 to 123429055 6 + TSS region transcription start site region 48794
Tssr48795 5 123442290 to 123442304 14 + TSS region transcription start site region 48795
Tssr48796 5 123445797 to 123445812 15 + TSS region transcription start site region 48796
Tssr48797 5 123462471 to 123462508 37 + TSS region transcription start site region 48797
Rpl31-ps6 5 123466509 to 123466886 377 + pseudogene ribosomal protein L31, pseudogene 6
Il31 5 123480149 to 123482634 2485 - protein coding gene interleukin 31
Tssr53240 5 123482569 to 123482598 29 - TSS region transcription start site region 53240
Tssr53241 5 123482609 to 123482627 18 - TSS region transcription start site region 53241
Tssr53242 5 123482633 to 123482644 11 - TSS region transcription start site region 53242
Cpgi16586 5 123489185 to 123489492 307 CpG island CpG island 16586
Tssr48798 5 123489301 to 123489329 28 + TSS region transcription start site region 48798
Lrrc43 5 123489305 to 123508205 18900 + protein coding gene leucine rich repeat containing 43
Cpgi16587 5 123507978 to 123509012 1034 CpG island CpG island 16587
Gm15751 5 123508395 to 123514011 5616 + sense overlapping lncRNA gene predicted gene 15751
Tssr48799 5 123508476 to 123508491 15 + TSS region transcription start site region 48799
B3gnt4 5 123510460 to 123511882 1422 + protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
Diablo 5 123511330 to 123524164 12834 - protein coding gene diablo, IAP-binding mitochondrial protein
Gm49027 5 123512082 to 123525488 13406 - protein coding gene predicted gene, 49027