MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:123309582-123379629

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Wdr66	5	123253856 to 123327484	73628	+	protein coding gene	WD repeat domain 66
Gm15857	5	123293638 to 123310324	16686	-	antisense lncRNA gene	predicted gene 15857
Tssr53236	5	123310349 to 123310360	11	-	TSS region	transcription start site region 53236
Tssr48783	5	123310499 to 123310522	23	+	TSS region	transcription start site region 48783
Tssr48784	5	123310533 to 123310544	11	+	TSS region	transcription start site region 48784
Gm15860	5	123334313 to 123345138	10825	-	antisense lncRNA gene	predicted gene 15860
Tssr48785	5	123343956 to 123343970	14	+	TSS region	transcription start site region 48785
Cpgi16582	5	123343979 to 123345849	1870		CpG island	CpG island 16582
Tssr48786	5	123344336 to 123344347	11	+	TSS region	transcription start site region 48786
Tssr48787	5	123344440 to 123344576	136	+	TSS region	transcription start site region 48787
Bcl7a	5	123344448 to 123374083	29635	+	protein coding gene	B cell CLL/lymphoma 7A
Tssr48788	5	123344582 to 123344629	47	+	TSS region	transcription start site region 48788
Tssr48789	5	123344666 to 123344675	9	+	TSS region	transcription start site region 48789
Tssr1629	5	123344929 to 123344933	4	+	TSS region	transcription start site region 1629
Tssr53237	5	123345855 to 123345860	5	-	TSS region	transcription start site region 53237
Gm23458	5	123360832 to 123361000	168	+	snRNA gene	predicted gene, 23458
5830487J09Rik	5	123366472 to 123368919	2447	+	unclassified gene	RIKEN cDNA 5830487J09 gene
Cpgi16583	5	123373244 to 123373606	362		CpG island	CpG island 16583