Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123118619-123138634

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rhof 5 123118180 to 123132629 14449 - protein coding gene ras homolog family member F (in filopodia)
Tssr53194 5 123128512 to 123128523 11 - TSS region transcription start site region 53194
Tssr48756 5 123128619 to 123128634 15 + TSS region transcription start site region 48756
Tssr53195 5 123130824 to 123130834 10 - TSS region transcription start site region 53195
Tssr53196 5 123130845 to 123130852 7 - TSS region transcription start site region 53196
Tssr53197 5 123130855 to 123130868 13 - TSS region transcription start site region 53197
Tssr48757 5 123131005 to 123131039 34 + TSS region transcription start site region 48757
Cpgi16573 5 123131930 to 123133175 1245 CpG island CpG island 16573
Tssr53198 5 123132272 to 123132283 11 - TSS region transcription start site region 53198
Tssr53199 5 123132302 to 123132317 15 - TSS region transcription start site region 53199
Tssr53200 5 123132383 to 123132403 20 - TSS region transcription start site region 53200
Tssr53201 5 123132404 to 123132434 30 - TSS region transcription start site region 53201
Tssr53202 5 123132577 to 123132606 29 - TSS region transcription start site region 53202
Tssr53203 5 123132651 to 123132678 27 - TSS region transcription start site region 53203
AI480526 5 123133723 to 123141666 7943 - lincRNA gene expressed sequence AI480526
Gm38102 5 123133939 to 123137695 3756 + lincRNA gene predicted gene, 38102
Tssr53204 5 123134170 to 123134173 3 - TSS region transcription start site region 53204
Cpgi16574 5 123135465 to 123135731 266 CpG island CpG island 16574
Tssr53205 5 123135507 to 123135530 23 - TSS region transcription start site region 53205
Tssr53206 5 123135548 to 123135559 11 - TSS region transcription start site region 53206
Tssr48758 5 123135617 to 123135632 15 + TSS region transcription start site region 48758
Tssr48759 5 123135791 to 123135802 11 + TSS region transcription start site region 48759
Tssr48760 5 123135833 to 123135855 22 + TSS region transcription start site region 48760
Tssr53207 5 123136538 to 123136555 17 - TSS region transcription start site region 53207
Tssr48761 5 123136639 to 123136672 33 + TSS region transcription start site region 48761
Tssr53208 5 123137718 to 123137740 22 - TSS region transcription start site region 53208
Cpgi16575 5 123137742 to 123137920 178 CpG island CpG island 16575
Cpgi16576 5 123138507 to 123139347 840 CpG island CpG island 16576
Tssr48762 5 123138611 to 123138635 24 + TSS region transcription start site region 48762