MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:122838523-122938756

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm33044	5	122849628 to 122850136	508	-	lncRNA gene	predicted gene, 33044
Cpgi16561	5	122849792 to 122850923	1131		CpG island	CpG island 16561
Tssr53155	5	122849872 to 122849890	18	-	TSS region	transcription start site region 53155
Tssr48722	5	122850135 to 122850142	7	+	TSS region	transcription start site region 48722
Tssr48723	5	122850154 to 122850165	11	+	TSS region	transcription start site region 48723
Rnf34	5	122850162 to 122868945	18783	+	protein coding gene	ring finger protein 34
Tssr48724	5	122850167 to 122850178	11	+	TSS region	transcription start site region 48724
Tssr48725	5	122850186 to 122850198	12	+	TSS region	transcription start site region 48725
Tssr48726	5	122850199 to 122850214	15	+	TSS region	transcription start site region 48726
Kdm2b	5	122870664 to 122989162	118498	-	protein coding gene	lysine (K)-specific demethylase 2B
Cpgi16562	5	122888523 to 122888756	233		CpG island	CpG island 16562
Tssr53156	5	122899109 to 122899113	4	-	TSS region	transcription start site region 53156
Cpgi16563	5	122899242 to 122901264	2022		CpG island	CpG island 16563
Tssr53157	5	122900267 to 122900377	110	-	TSS region	transcription start site region 53157
Tssr53158	5	122901698 to 122901720	22	-	TSS region	transcription start site region 53158
Gm43411	5	122906822 to 122908400	1578	-	unclassified gene	predicted gene 43411
Tssr53159	5	122915035 to 122915041	6	-	TSS region	transcription start site region 53159
Tssr53160	5	122922088 to 122922103	15	-	TSS region	transcription start site region 53160