Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:121959395-122079429

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cux2 5 121857962 to 122050417 192455 - protein coding gene cut-like homeobox 2
Tssr48612 5 121981632 to 121981634 2 + TSS region transcription start site region 48612
Tssr53068 5 122002311 to 122002320 9 - TSS region transcription start site region 53068
Tssr53069 5 122002340 to 122002368 28 - TSS region transcription start site region 53069
Tssr53070 5 122019395 to 122019429 34 - TSS region transcription start site region 53070
Gm3970 5 122025330 to 122029697 4367 + antisense lncRNA gene predicted gene 3970
Gm15637 5 122048382 to 122055654 7272 + antisense lncRNA gene predicted gene 15637
Cpgi16539 5 122048947 to 122050896 1949 CpG island CpG island 16539
Tssr53071 5 122049822 to 122049882 60 - TSS region transcription start site region 53071
Tssr53072 5 122050133 to 122050158 25 - TSS region transcription start site region 53072
Tssr53073 5 122050218 to 122050231 13 - TSS region transcription start site region 53073
Cpgi16540 5 122053697 to 122054015 318 CpG island CpG island 16540
Cpgi16541 5 122059171 to 122060047 876 CpG island CpG island 16541
Tssr48613 5 122061437 to 122061448 11 + TSS region transcription start site region 48613