Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:121902311-122102320

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cux2 5 121857962 to 122050417 192455 - protein coding gene cut-like homeobox 2
Tssr53067 5 121916720 to 121916757 37 - TSS region transcription start site region 53067
Cpgi16538 5 121948568 to 121948857 289 CpG island CpG island 16538
Tssr48612 5 121981632 to 121981634 2 + TSS region transcription start site region 48612
Tssr53068 5 122002311 to 122002320 9 - TSS region transcription start site region 53068
Tssr53069 5 122002340 to 122002368 28 - TSS region transcription start site region 53069
Tssr53070 5 122019395 to 122019429 34 - TSS region transcription start site region 53070
Gm3970 5 122025330 to 122029697 4367 + antisense lncRNA gene predicted gene 3970
Gm15637 5 122048382 to 122055654 7272 + antisense lncRNA gene predicted gene 15637
Cpgi16539 5 122048947 to 122050896 1949 CpG island CpG island 16539
Tssr53071 5 122049822 to 122049882 60 - TSS region transcription start site region 53071
Tssr53072 5 122050133 to 122050158 25 - TSS region transcription start site region 53072
Tssr53073 5 122050218 to 122050231 13 - TSS region transcription start site region 53073
Cpgi16540 5 122053697 to 122054015 318 CpG island CpG island 16540
Cpgi16541 5 122059171 to 122060047 876 CpG island CpG island 16541
Tssr48613 5 122061437 to 122061448 11 + TSS region transcription start site region 48613
Tssr53074 5 122084900 to 122084906 6 - TSS region transcription start site region 53074
Cpgi16542 5 122091150 to 122091395 245 CpG island CpG island 16542
Tssr48614 5 122093174 to 122093190 16 + TSS region transcription start site region 48614
Gm32672 5 122093214 to 122099354 6140 + lncRNA gene predicted gene, 32672
Tssr48615 5 122093516 to 122093523 7 + TSS region transcription start site region 48615
Tssr48616 5 122093547 to 122093561 14 + TSS region transcription start site region 48616
Tssr48617 5 122093568 to 122093595 27 + TSS region transcription start site region 48617
Tssr48618 5 122093851 to 122093864 13 + TSS region transcription start site region 48618
Tssr48619 5 122100784 to 122100807 23 + TSS region transcription start site region 48619
Tssr48620 5 122100816 to 122100851 35 + TSS region transcription start site region 48620
Myl2 5 122100904 to 122113398 12494 + protein coding gene myosin, light polypeptide 2, regulatory, cardiac, slow
Tssr48621 5 122100944 to 122100958 14 + TSS region transcription start site region 48621
Tssr48622 5 122100972 to 122100986 14 + TSS region transcription start site region 48622
Tssr48623 5 122101146 to 122101159 13 + TSS region transcription start site region 48623
Tssr48624 5 122101163 to 122101177 14 + TSS region transcription start site region 48624
Tssr48625 5 122101777 to 122101799 22 + TSS region transcription start site region 48625