Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:121838568-122058857

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm32422 5 121838129 to 121839260 1131 + lncRNA gene predicted gene, 32422
Cpgi16534 5 121838440 to 121839106 666 CpG island CpG island 16534
Cpgi16535 5 121842606 to 121843311 705 CpG island CpG island 16535
4933437G19Rik 5 121847667 to 121848844 1177 - unclassified gene RIKEN cDNA 4933437G19 gene
Cpgi16536 5 121848690 to 121849362 672 CpG island CpG island 16536
Tssr53062 5 121848838 to 121848864 26 - TSS region transcription start site region 53062
Tssr48609 5 121848975 to 121848982 7 + TSS region transcription start site region 48609
Tssr48610 5 121848987 to 121849002 15 + TSS region transcription start site region 48610
Pheta1 5 121849001 to 121854606 5605 + protein coding gene PH domain containing endocytic trafficking adaptor 1
Tssr48611 5 121849021 to 121849037 16 + TSS region transcription start site region 48611
Gm42021 5 121856143 to 121860491 4348 + lncRNA gene predicted gene, 42021
Cux2 5 121857962 to 122050417 192455 - protein coding gene cut-like homeobox 2
Tssr53063 5 121859147 to 121859150 3 - TSS region transcription start site region 53063
Tssr53064 5 121859980 to 121859984 4 - TSS region transcription start site region 53064
Tssr53065 5 121860103 to 121860106 3 - TSS region transcription start site region 53065
Cpgi16537 5 121864597 to 121865021 424 CpG island CpG island 16537
Tssr53066 5 121895344 to 121895349 5 - TSS region transcription start site region 53066
Tssr53067 5 121916720 to 121916757 37 - TSS region transcription start site region 53067
Cpgi16538 5 121948568 to 121948857 289 CpG island CpG island 16538
Tssr48612 5 121981632 to 121981634 2 + TSS region transcription start site region 48612
Tssr53068 5 122002311 to 122002320 9 - TSS region transcription start site region 53068
Tssr53069 5 122002340 to 122002368 28 - TSS region transcription start site region 53069
Tssr53070 5 122019395 to 122019429 34 - TSS region transcription start site region 53070
Gm3970 5 122025330 to 122029697 4367 + antisense lncRNA gene predicted gene 3970
Gm15637 5 122048382 to 122055654 7272 + antisense lncRNA gene predicted gene 15637
Cpgi16539 5 122048947 to 122050896 1949 CpG island CpG island 16539
Tssr53071 5 122049822 to 122049882 60 - TSS region transcription start site region 53071
Tssr53072 5 122050133 to 122050158 25 - TSS region transcription start site region 53072
Tssr53073 5 122050218 to 122050231 13 - TSS region transcription start site region 53073
Cpgi16540 5 122053697 to 122054015 318 CpG island CpG island 16540