MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:121833129-121844260

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sh2b3	5	121815488 to 121837646	22158	-	protein coding gene	SH2B adaptor protein 3
Tssr48604	5	121835192 to 121835197	5	+	TSS region	transcription start site region 48604
1700008B11Rik	5	121835195 to 121835828	633	+	antisense lncRNA gene	RIKEN cDNA 1700008B11 gene
Tssr48605	5	121835226 to 121835232	6	+	TSS region	transcription start site region 48605
Cpgi16533	5	121835954 to 121837806	1852		CpG island	CpG island 16533
Tssr53055	5	121836247 to 121836279	32	-	TSS region	transcription start site region 53055
Tssr53056	5	121836753 to 121836764	11	-	TSS region	transcription start site region 53056
Tssr53057	5	121836787 to 121836798	11	-	TSS region	transcription start site region 53057
Tssr53058	5	121836810 to 121836845	35	-	TSS region	transcription start site region 53058
Tssr53059	5	121836852 to 121836880	28	-	TSS region	transcription start site region 53059
Tssr48606	5	121837240 to 121837255	15	+	TSS region	transcription start site region 48606
Tssr48607	5	121837258 to 121837275	17	+	TSS region	transcription start site region 48607
Tssr48608	5	121837283 to 121837294	11	+	TSS region	transcription start site region 48608
Tssr53060	5	121837602 to 121837606	4	-	TSS region	transcription start site region 53060
Tssr53061	5	121837613 to 121837689	76	-	TSS region	transcription start site region 53061
Gm32422	5	121838129 to 121839260	1131	+	lncRNA gene	predicted gene, 32422
Cpgi16534	5	121838440 to 121839106	666		CpG island	CpG island 16534
Cpgi16535	5	121842606 to 121843311	705		CpG island	CpG island 16535