Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:121671455-121751479

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Brap 5 121660563 to 121687249 26686 + protein coding gene BRCA1 associated protein
Tssr53052 5 121673987 to 121673989 2 - TSS region transcription start site region 53052
Tssr48590 5 121686628 to 121686630 2 + TSS region transcription start site region 48590
Cpgi16530 5 121692506 to 121692714 208 CpG island CpG island 16530
1700064N11Rik 5 121710786 to 121711480 694 unclassified gene RIKEN cDNA 1700064N11 gene
Cpgi16531 5 121711029 to 121713322 2293 CpG island CpG island 16531
Tssr53053 5 121711455 to 121711479 24 - TSS region transcription start site region 53053
Atxn2 5 121711609 to 121814950 103341 + protein coding gene ataxin 2
Tssr48591 5 121711785 to 121711859 74 + TSS region transcription start site region 48591
Tssr48592 5 121711908 to 121711915 7 + TSS region transcription start site region 48592
Tssr48593 5 121712039 to 121712050 11 + TSS region transcription start site region 48593
Tssr48594 5 121712068 to 121712071 3 + TSS region transcription start site region 48594
Tssr48595 5 121712467 to 121712475 8 + TSS region transcription start site region 48595
Tssr48596 5 121714175 to 121714180 5 + TSS region transcription start site region 48596
Gm43571 5 121715109 to 121718206 3097 + unclassified gene predicted gene 43571
Tssr48597 5 121715127 to 121715131 4 + TSS region transcription start site region 48597
Gm16552 5 121717666 to 121727403 9737 - antisense lncRNA gene predicted gene 16552
Tssr48598 5 121738831 to 121738864 33 + TSS region transcription start site region 48598
Gm42866 5 121742417 to 121745720 3303 + unclassified gene predicted gene 42866
Tssr48599 5 121742440 to 121742446 6 + TSS region transcription start site region 48599
Tssr48600 5 121748169 to 121748173 4 + TSS region transcription start site region 48600