Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:121538865-121698925

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42878 5 121518613 to 121545482 26869 - protein coding gene predicted gene 42878
Mapkapk5 5 121525051 to 121545892 20841 - protein coding gene MAP kinase-activated protein kinase 5
Cpgi16526 5 121544747 to 121546319 1572 CpG island CpG island 16526
Tssr53038 5 121545713 to 121545748 35 - TSS region transcription start site region 53038
Aldh2 5 121566027 to 121593824 27797 - protein coding gene aldehyde dehydrogenase 2, mitochondrial
Tssr48585 5 121567703 to 121567726 23 + TSS region transcription start site region 48585
Tssr53039 5 121567799 to 121567814 15 - TSS region transcription start site region 53039
Alpq7 5 121567876 to 121567876 0 QTL alcohol preference QTL 7
Tssr53040 5 121568989 to 121569002 13 - TSS region transcription start site region 53040
Tssr53041 5 121572114 to 121572125 11 - TSS region transcription start site region 53041
Tssr53042 5 121572709 to 121572720 11 - TSS region transcription start site region 53042
Tssr53043 5 121576008 to 121576035 27 - TSS region transcription start site region 53043
Cpgi16527 5 121593014 to 121593859 845 CpG island CpG island 16527
Tssr53044 5 121593482 to 121593493 11 - TSS region transcription start site region 53044
Tssr53045 5 121593552 to 121593603 51 - TSS region transcription start site region 53045
Gm42879 5 121593695 to 121595908 2213 + unclassified gene predicted gene 42879
Tssr53046 5 121593773 to 121593789 16 - TSS region transcription start site region 53046
Acad12 5 121598277 to 121618938 20661 - protein coding gene acyl-Coenzyme A dehydrogenase family, member 12
Cpgi16528 5 121618653 to 121619503 850 CpG island CpG island 16528
Tssr53047 5 121618839 to 121618862 23 - TSS region transcription start site region 53047
Tssr53048 5 121618865 to 121618925 60 - TSS region transcription start site region 53048
Tssr48586 5 121619032 to 121619087 55 + TSS region transcription start site region 48586
Acad10 5 121621026 to 121660510 39484 - protein coding gene acyl-Coenzyme A dehydrogenase family, member 10
Cpgi16529 5 121660119 to 121661387 1268 CpG island CpG island 16529
Tssr53049 5 121660378 to 121660397 19 - TSS region transcription start site region 53049
Tssr53050 5 121660410 to 121660419 9 - TSS region transcription start site region 53050
Tssr1624 5 121660442 to 121660476 34 - TSS region transcription start site region 1624
Tssr53051 5 121660477 to 121660519 42 - TSS region transcription start site region 53051
Tssr48587 5 121660528 to 121660631 103 + TSS region transcription start site region 48587
Brap 5 121660563 to 121687249 26686 + protein coding gene BRCA1 associated protein
Tssr48588 5 121660642 to 121660645 3 + TSS region transcription start site region 48588
Tssr48589 5 121660877 to 121660896 19 + TSS region transcription start site region 48589
Tssr53052 5 121673987 to 121673989 2 - TSS region transcription start site region 53052
Tssr48590 5 121686628 to 121686630 2 + TSS region transcription start site region 48590
Cpgi16530 5 121692506 to 121692714 208 CpG island CpG island 16530